PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf09087g00009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26332.3 Da PI: 6.0821 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.6e-18 | 40 | 90 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g Niben101Scf09087g00009.1 40 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 90 59*****998.**********9...336*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 22.023 | 41 | 100 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.62E-18 | 41 | 100 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.1E-32 | 41 | 104 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.6E-11 | 41 | 90 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-28 | 41 | 100 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.7E-9 | 42 | 53 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.70E-14 | 44 | 100 | No hit | No description |
PRINTS | PR00367 | 5.7E-9 | 64 | 80 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MVKTEQKTLA AEASKNIMSL SSSSSSSNNN NNNNMKIKKK KYKGVRMRSW GSWVSEIRAP 60 NQKTRIWLGS YSTAEAAARA YDAALLCLKG PSAANNLNFP FNSSFYHHID LDHHTSTTLS 120 PKAIQRVAAA AASAAEGVAV NVENNVPSPP LSSTSTSTNS SSPLSHEDQL DEVSLLPIFD 180 HHATLEEETT TVSMMGQWYN FDSPKYNDML HGTVFFDPPL MEEIYYEEGS ADIPLWSFC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009781193.1 | 1e-123 | PREDICTED: ethylene-responsive transcription factor ERF014-like | ||||
Refseq | XP_016504621.1 | 1e-123 | PREDICTED: ethylene-responsive transcription factor ERF014-like | ||||
Swissprot | Q9SFE4 | 5e-47 | ERF12_ARATH; Ethylene-responsive transcription factor ERF012 | ||||
TrEMBL | A0A1S4CU26 | 1e-121 | A0A1S4CU26_TOBAC; ethylene-responsive transcription factor ERF014-like | ||||
TrEMBL | A0A1U7WRI2 | 1e-121 | A0A1U7WRI2_NICSY; ethylene-responsive transcription factor ERF014-like | ||||
STRING | XP_009781193.1 | 1e-122 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6177 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 7e-33 | ERF family protein |
Publications ? help Back to Top | |||
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