PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf08776g00003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 65aa MW: 7661.05 Da PI: 12.066 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.9e-18 | 17 | 64 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 y+GVr + +g+Wv+eIr+ +gk+ r++lg+f t+++Aa+a++ a++++ Niben101Scf08776g00003.1 17 IYRGVRMRN-WGKWVSEIRE---RGKKSRIWLGTFPTPQMAARAHDVAALAI 64 69****998.*******999...3567*********************9976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 7.52E-23 | 16 | 64 | No hit | No description |
SuperFamily | SSF54171 | 7.85E-18 | 17 | 64 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.2E-13 | 17 | 64 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.6E-20 | 17 | 65 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-25 | 17 | 64 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.296 | 17 | 65 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-10 | 18 | 29 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-10 | 40 | 56 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 65 aa Download sequence Send to blast |
MEAKKIKRIR ESNKHTIYRG VRMRNWGKWV SEIRERGKKS RIWLGTFPTP QMAARAHDVA 60 ALAIK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016468873.1 | 2e-37 | PREDICTED: dehydration-responsive element-binding protein 3-like, partial | ||||
Swissprot | Q9LYD3 | 1e-30 | DREB3_ARATH; Dehydration-responsive element-binding protein 3 | ||||
TrEMBL | A0A1S3ZX01 | 4e-36 | A0A1S3ZX01_TOBAC; dehydration-responsive element-binding protein 3-like | ||||
STRING | XP_009801170.1 | 3e-36 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 4e-33 | ERF family protein |
Publications ? help Back to Top | |||
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