PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf08078g02023.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 717aa    MW: 78807.7 Da    PI: 9.4879
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf08078g02023.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.3e-11285343563
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               kr++r   NR +A rs +RK+ +i eLe kv+++++e ++L k++  l+k   +l+s +
  Niben101Scf08078g02023.1 285 KRAKRILANRQSAARSKERKLRYISELEHKVQTFQTEATTLSKQVTILQKDFTELTSLN 343
                               9**************************************************99999876 PP
2bZIP_136.61e-11570628563
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               kr++r   NR +A rs +RK+ +i eLe kv+++++e ++L k++  l+k   +l+s +
  Niben101Scf08078g02023.1 570 KRAKRILANRQSAARSKERKLRYISELEHKVQTFQTEATTLSKQVTILQKDFTELTSLN 628
                               9**************************************************99999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-17281345IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.795283346IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.9E-11285341No hitNo description
PfamPF001702.2E-10285343IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-11285341No hitNo description
CDDcd147034.63E-20286337No hitNo description
SMARTSM003381.6E-17566630IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.795568631IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-11570626No hitNo description
PfamPF001708.1E-11570628IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.16E-11570626No hitNo description
CDDcd147034.63E-20571622No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    Send to blast
MAQPNSKPPI SHNFGGGASH TWSLSQPSIF SNNGLPPLSP FPHSESSMAS ANSSLKDTSM  60
EEVDVSSRGP PFVSSLTREI TFRCSDSLPP KKEHRRSNSD VPLGFSAMIQ SSLQLMPISG  120
QGVLGGATLL GDPLRPKSEG EVVDKLYINL ENMEALNSSI TEDKAKDSIA SRTKLSSGNS  180
SNNEAETVKG TSIKRSADAD ITPTTRHFRS LSMDSAIGSF QYGEESPKLT TSLVNCPGQL  240
SSSKSRNENS GKINFDLGNG EFSEAEMRKI MADERLAEIV VSDPKRAKRI LANRQSAARS  300
KERKLRYISE LEHKVQTFQT EATTLSKQVT ILQKDFTELT SLNNELRFRL QALEQQAQLR  360
DGMEITFRCS DSLPPKKEHR RSNSDVPLGF SAMIQSSLQL MPISGQGVLG GATLLGDPLR  420
PKSEGEVVDK LYINLENMEA LNSSITEDKA KDSIASRTKL SSGNSSNNEA ETVKGTSIKR  480
SADADITPTT RHFRSLSMDS AIGSFQYGEE SPKLTTSLVN CPGQLSSSKS RNENSGKINF  540
DLGNGEFSEA EMRKIMADER LAEIVVSDPK RAKRILANRQ SAARSKERKL RYISELEHKV  600
QTFQTEATTL SKQVTILQKD FTELTSLNNE LRFRLQALEQ QAQLRDALHE ALTAEVKRLK  660
LTMGELKEGR LPNSIARQMP MKPNMFQKQH QQSSEIQQFS VAKPNTAIKA SATPASA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019223832.10.0PREDICTED: transcription factor RF2a-like
TrEMBLA0A314KW710.0A0A314KW71_NICAT; Transcription factor rf2a
STRINGXP_009803494.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.37e-71bZIP family protein