PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf06413g02012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 107aa MW: 12580.5 Da PI: 5.2289 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.4 | 9.6e-10 | 61 | 93 | 2 | 37 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfg 37 +y GVr ++ +g+++AeIrd + ng r++lg+f Niben101Scf06413g02012.1 61 HYIGVRKRP-WGKFAAEIRDSTRNG--IRVWLGTFI 93 699******.**********44465..*******95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 5.0E-4 | 61 | 98 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-13 | 61 | 92 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.3E-4 | 61 | 92 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.27E-9 | 61 | 92 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 12.457 | 61 | 92 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MNTSSCSELL FDSDWPPLFL NTDDVEEQKM ISWEKSVSEA DFFEVIKCEK VQELPNKEEN 60 HYIGVRKRPW GKFAAEIRDS TRNGIRVWLG TFILLKKLLW LMTKLPS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009764685.1 | 4e-59 | PREDICTED: ethylene-responsive transcription factor 1B-like | ||||
TrEMBL | A0A1U7VS01 | 9e-58 | A0A1U7VS01_NICSY; ethylene-responsive transcription factor 1B-like | ||||
STRING | XP_009764685.1 | 2e-58 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 5e-18 | ethylene response factor 1 |