PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf05948g02026.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 325aa MW: 35102.1 Da PI: 8.2858

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf05948g02026.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	206.2	9e-64	2	144	1	148
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+vedDGttyrkg+kp +++ +g s Niben101Scf05948g02026.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEDDGTTYRKGCKPVHHM-DIGGS 85 5899**********************************************************************555.56789 PP DUF822 86 asaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148 as+sp+ss+q sp +sy++sp+sss+psp+s+ i ++ +sl+p+l++ls+ ss Niben101Scf05948g02026.1 86 ASVSPCSSYQ--------LSPGASYNPSPASSSIPSPVSSHYIAKVQNnsdpNSLIPWLKNLSSGSS 144 9*****........778888888888888888887776654444466699*****998443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.0E-64	3	140	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG 60 WIVEDDGTTY RKGCKPVHHM DIGGSASVSP CSSYQLSPGA SYNPSPASSS IPSPVSSHYI 120 AKVQNNSDPN SLIPWLKNLS SGSSPSSSNF PHHLCIPGDS ISAPVTPPSS SPTARTPRMN 180 DNWENPTANS TWIQRHYPFL PFSTPPSPGR QTPPDSGWLS GVQTPQDGPS SPTFSLVSSN 240 PFGFKEPLSN GGSRMWTPGQ SGTCSPAVGA GMDQTADIPM SDVISAEFAF GSNVKGVVKP 300 WEGERIHEEC VSDDLELTLG NSSTR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009607196.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
Refseq	XP_009607197.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
Refseq	XP_016468029.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
Refseq	XP_016468030.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
Swissprot	Q9ZV88	1e-126	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A1S3ZUM4	0.0	A0A1S3ZUM4_TOBAC; BES1/BZR1 homolog protein 4-like isoform X1
STRING	XP_009607196.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1984	24	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-100	BES1/BZR1 homolog 4