PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf04505g02007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 102aa MW: 11697.4 Da PI: 10.1848 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.2 | 1.3e-10 | 2 | 36 | 18 | 55 |
AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 eIr+p++ r+r +lg+f taeeAa a+++a+++l+g Niben101Scf04505g02007.1 2 EIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 36 6889854...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 15.079 | 1 | 44 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.43E-19 | 2 | 45 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 6.8E-19 | 2 | 45 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.9E-12 | 2 | 45 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.2E-14 | 2 | 50 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.5E-6 | 7 | 36 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MEIREPKKRT RLWLGSFATA EEAAMAYDEA ARRLYGPDAY LNLPHMRANF NPLNKSQKFK 60 WFSSGNFVSS FPNCTTGLLN LSAQPNVHVI HQRLQELKKT EA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity-inducible transcription. {ECO:0000269|PubMed:11798174}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By high-salt stress. {ECO:0000269|PubMed:11798174}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009804771.1 | 2e-67 | PREDICTED: dehydration-responsive element-binding protein 2F | ||||
Refseq | XP_016440548.1 | 2e-67 | PREDICTED: dehydration-responsive element-binding protein 2F-like | ||||
Swissprot | Q9SVX5 | 1e-43 | DRE2F_ARATH; Dehydration-responsive element-binding protein 2F | ||||
TrEMBL | A0A1S3XKV1 | 4e-66 | A0A1S3XKV1_TOBAC; dehydration-responsive element-binding protein 2F-like | ||||
TrEMBL | A0A1U7YS46 | 4e-66 | A0A1U7YS46_NICSY; dehydration-responsive element-binding protein 2F | ||||
STRING | XP_009804771.1 | 6e-67 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7098 | 23 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57600.1 | 5e-34 | ERF family protein |
Publications ? help Back to Top | |||
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