PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf04132g01002.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 328aa MW: 35700.6 Da PI: 7.7627

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf04132g01002.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	205.5	1.6e-63	2	145	1	148
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 ++++r p+wkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGtty+kg+kp e+++ + s Niben101Scf04132g01002.1 2 TSGTRLPSWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWIVEEDGTTYKKGCKPVERMDNICYS 86 5899******************************************************************************* PP DUF822 86 asaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148 as+sp+ss+q +sp +sy++sp+ss fpsp+s+ + ++++ +sl+p+l++ls+ ss Niben101Scf04132g01002.1 87 ASVSPCSSYQ--------PSPGASYNPSPASSYFPSPVSSRYVANSQNnsdpNSLIPWLKNLSSGSS 145 ******........777777777777777777777766655544566699*****998443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.6E-64	4	141	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MTSGTRLPSW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG 60 WIVEEDGTTY KKGCKPVERM DNICYSASVS PCSSYQPSPG ASYNPSPASS YFPSPVSSRY 120 VANSQNNSDP NSLIPWLKNL SSGSSPSSSK FPHHLYIPGS SRSAPVTPPL SSPTARTPRM 180 RDDPIADPTS WVQQHYAFLP SSTPASPGRQ TPPDSGWLSG VQTQQDEPSS PTFSLVSPNP 240 FGFREPLSNG GSRLWTPGQS GACSPAIGAG IDQASDVPMA DDISAEFAFG SNMKGLVKPW 300 EGERIHEECV TDDLELTLGN SSTRDEQK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019253074.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like
Swissprot	Q9ZV88	1e-126	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A1J6ICS2	0.0	A0A1J6ICS2_NICAT; Bes1bzr1-like protein 4
STRING	XP_009590977.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1984	24	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-127	BES1/BZR1 homolog 4