PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf03930g01015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 133aa MW: 14754.9 Da PI: 10.7936 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 2.8e-19 | 16 | 63 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52 ++++GVr+++ +g+WvAeIr+p +r++lg+f tae+Aa+a+++a+ Niben101Scf03930g01015.1 16 KKFRGVRQRH-WGSWVAEIRHP-----LlkRRVWLGTFETAEKAARAYDEAAVL 63 59*******9.**********8.....334*********************965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.21E-33 | 16 | 76 | No hit | No description |
SuperFamily | SSF54171 | 3.27E-21 | 17 | 75 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.5E-12 | 17 | 61 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-33 | 17 | 75 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-40 | 17 | 80 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.786 | 17 | 74 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.6E-10 | 18 | 29 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.6E-10 | 40 | 56 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
LSDSVSPLTP SMVQAKKFRG VRQRHWGSWV AEIRHPLLKR RVWLGTFETA EKAARAYDEA 60 AVLMCGRNAK TNFPVAAPNE NGKDTNTNIV NSAKLRKCCK SPSPSLTCLR LDTESSSIGV 120 WQKRAGARPD SSW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-16 | 13 | 75 | 1 | 64 | ATERF1 |
3gcc_A | 1e-16 | 13 | 75 | 1 | 64 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009784695.1 | 1e-78 | PREDICTED: ethylene-responsive transcription factor WIN1 | ||||
Refseq | XP_016445030.1 | 1e-78 | PREDICTED: ethylene-responsive transcription factor WIN1-like | ||||
Swissprot | Q9XI33 | 1e-62 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A1S3XYQ6 | 3e-77 | A0A1S3XYQ6_TOBAC; ethylene-responsive transcription factor WIN1-like | ||||
TrEMBL | A0A1U7XE13 | 3e-77 | A0A1U7XE13_NICSY; ethylene-responsive transcription factor WIN1 | ||||
STRING | XP_009784695.1 | 6e-78 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1352 | 24 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 3e-55 | ERF family protein |