PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf03321g01009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25788.8 Da PI: 5.7483 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.7 | 4.6e-16 | 46 | 96 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ + +Wv+ +r+p+ + kr++l ++ tae+Aa+a++ a+++l+g+ Niben101Scf03321g01009.1 46 IYRGVRRRN-NDKWVCVLREPN----TqKRIWLRSYPTAEMAARAHDVAALALRGH 96 69****887.8*********83....25**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 4.6E-11 | 45 | 96 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.08E-24 | 45 | 105 | No hit | No description |
SMART | SM00380 | 7.0E-22 | 46 | 109 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.44 | 46 | 103 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-18 | 46 | 105 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 4.9E-25 | 46 | 105 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-5 | 47 | 58 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-5 | 69 | 85 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MMDNSSSSCS SVIRAEASDE EVILLASSKP KKRAGRKKLK ETRHPIYRGV RRRNNDKWVC 60 VLREPNTQKR IWLRSYPTAE MAARAHDVAA LALRGHLATL NFADSAWRLQ VPVSKDPKDL 120 RQAAARAAEA FWPGEETDVN SRGAANAGNG HEEMKAAAEE NAANDCMQNL VTAENVLYSN 180 SCGEVGTFGT QEWQTNMEEG SLLSPNPCLL GSCFSWDDDV ESNVEVLLWS YSI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019228547.1 | 1e-153 | PREDICTED: dehydration-responsive element-binding protein 1E-like | ||||
TrEMBL | A0A314KMZ1 | 1e-152 | A0A314KMZ1_NICAT; Dehydration-responsive element-binding protein 1f | ||||
STRING | XP_009785658.1 | 1e-147 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA263 | 24 | 183 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63030.2 | 2e-30 | ERF family protein |