PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf02145g09012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 630aa MW: 68458.7 Da PI: 6.8782 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.9 | 1.4e-30 | 302 | 360 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Niben101Scf02145g09012.1 302 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 360 7*********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.4E-33 | 286 | 362 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.5E-28 | 294 | 362 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.562 | 296 | 362 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-36 | 301 | 361 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-26 | 303 | 360 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 10.028 | 398 | 442 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.8E-5 | 418 | 442 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 630 aa Download sequence Send to blast |
MDKGWGLTLE NSSDKVGFFK NKPFFGFNLS PRLNNIKGGE MFSGAEFPAD DKRPGMVNEV 60 DFFSEKKSIH DVVKNENPQG NNTMRTDLFV NTGLQLVTAN TGISDQSTID DGVSSEAEDK 120 RTKNELAQLQ VELERMNTEN QRLKGMLTQV TNSYSALQMH LVTLMQQQQQ QQQLISRTES 180 THNHEVIEVK SEEKNQEKGR NIVPRQFMEL DPSSAKADPM DEPSQSHSTS EERTLSGSPR 240 NNMEMSRDKA IGREESPESE SWVPNKVPKL MNSSNPVEQT TEATMRKARV SVRARSEAPM 300 ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGTHNHP 360 LPPAAMAMAS TTSAAANMLL SGSMPSADGL MNTNFLARTI LPCSSNMATI SASAPFPTVQ 420 RCAEDRTILI TTYEGTHNHP LPPAAMAMAS TTSAAANMLL SGSMPSADGL MNTNFLARTI 480 LPCSSNMATI SASAPFPTVT LDLTQNPNAM SNYHQRNAAT QFQVPLPTGL NHPNFVGSMS 540 APQMPQVLGQ ALYNQSRFSG LQVSQDNIHH PSFSDTLSAA TAAITADPNF TAALAAAISS 600 IIGGSHPNSG NNPTFGPTSN SNKTSSFSGN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-22 | 288 | 364 | 1 | 76 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019250512.1 | 0.0 | PREDICTED: probable WRKY transcription factor 31 isoform X2 | ||||
Swissprot | Q9C519 | 1e-132 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A1S3Z416 | 0.0 | A0A1S3Z416_TOBAC; probable WRKY transcription factor 31 isoform X2 | ||||
TrEMBL | A0A1U7WGI9 | 0.0 | A0A1U7WGI9_NICSY; probable WRKY transcription factor 31 isoform X2 | ||||
STRING | XP_009776375.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA945 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-118 | WRKY family protein |