PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01942g04001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 238aa MW: 27512.2 Da PI: 7.7442 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.8 | 3.3e-11 | 135 | 158 | 1 | 24 |
---SS-EEEEEEE--TT-SS-EEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsY 24 ldDgy+WrKYG+K+vk++++pr Y Niben101Scf01942g04001.1 135 LDDGYKWRKYGKKKVKSNTNPREY 158 59*********************9 PP | |||||||
2 | WRKY | 52.7 | 8.6e-17 | 168 | 210 | 17 | 59 |
T-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 17 gsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 g++ r+YY+C+s gC+vkkkver+ d +++++tYeg+Hnhe Niben101Scf01942g04001.1 168 GNRLNRNYYKCSSGGCKVKKKVERDGIDSSYLITTYEGKHNHE 210 78899*************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-27 | 121 | 212 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.85E-9 | 128 | 158 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 24.845 | 130 | 212 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.9E-27 | 135 | 211 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.3E-6 | 136 | 158 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.8E-12 | 168 | 210 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.75E-13 | 168 | 212 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MFGSSTFQET INISHQTINP NFAFSPLINM NQDHGRNMYQ DFDTSFIDQL INDGEEYSNS 60 NNSFNSTSLY SQNYPFMQQE ISTSTYSGNS SASSFDATPT NIHMNENSSN NGIEKEKKAE 120 KHAIAFRTKT ELETLDDGYK WRKYGKKKVK SNTNPREYNI RNALTKWGNR LNRNYYKCSS 180 GGCKVKKKVE RDGIDSSYLI TTYEGKHNHE SPFIIHFHEK PTVSFHNDQW TLQADSLW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-19 | 127 | 212 | 9 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 1e-19 | 127 | 212 | 9 | 77 | Probable WRKY transcription factor 4 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009804801.1 | 1e-160 | PREDICTED: probable WRKY transcription factor 51 isoform X1 | ||||
Refseq | XP_016487858.1 | 1e-160 | PREDICTED: probable WRKY transcription factor 51 isoform X1 | ||||
TrEMBL | A0A1S4BG64 | 1e-159 | A0A1S4BG64_TOBAC; probable WRKY transcription factor 51 isoform X1 | ||||
TrEMBL | A0A1U7YS78 | 1e-159 | A0A1U7YS78_NICSY; probable WRKY transcription factor 51 isoform X1 | ||||
STRING | XP_009804801.1 | 1e-160 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13494 | 12 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 9e-10 | WRKY DNA-binding protein 51 |