PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf01212g03003.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 269aa    MW: 31202 Da    PI: 4.9407
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf01212g03003.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-19110160255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  Niben101Scf01212g03003.1 110 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAAMAYDKAALRIRG 160
                               7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-31109169IPR001471AP2/ERF domain
CDDcd000182.20E-30110168No hitNo description
SuperFamilySSF541711.05E-23110170IPR016177DNA-binding domain
PROSITE profilePS5103223.907110168IPR001471AP2/ERF domain
SMARTSM003802.2E-37110174IPR001471AP2/ERF domain
PfamPF008471.3E-14110160IPR001471AP2/ERF domain
PRINTSPR003674.3E-11111122IPR001471AP2/ERF domain
PRINTSPR003674.3E-11134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MTHVEKNQQQ EVACEEILEN VWANFISKNE VNEKAQRETN ELCPGKWEEL PSLERLPSLG  60
RWISMGADTW EELLNEILPP NDKIHSIDES TSKNEDVKVE KKKMVITTRH YRGVRRRPWG  120
KYAAEIRDSS RKGARVWLGT FNTAEEAAMA YDKAALRIRG PKAYLNFPLE TVAQAMGLSF  180
PEQEWTFPSS VSQIQGAYLG WDNQSISNSR KRVSRDWSMY EDLDVINELH LQKKIMRNWE  240
EDHDKSHDLE ILVFEDLGSD YLDSLLSSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-28109169161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016487472.10.0PREDICTED: ethylene-responsive transcription factor ERF091-like
SwissprotO495153e-39ERF91_ARATH; Ethylene-responsive transcription factor ERF091
TrEMBLA0A1S4BF420.0A0A1S4BF42_TOBAC; ethylene-responsive transcription factor ERF091-like
STRINGXP_009776179.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112371823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-25ERF family protein