PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf01001g02005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 71aa MW: 8037.94 Da PI: 10.2732 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.6 | 2.3e-12 | 41 | 71 | 3 | 33 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 + k rr+++NReAAr+sR+RKka++++Lee Niben101Scf01001g02005.1 41 DQKTLRRLAQNREAARKSRLRKKAYVQQLEE 71 67899************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-9 | 36 | 71 | No hit | No description |
PROSITE profile | PS50217 | 9.048 | 41 | 71 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.5E-9 | 42 | 71 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.99E-7 | 43 | 71 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 46 | 61 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 71 aa Download sequence Send to blast |
MMADISPSTS TDADTDDKNL RFLNSQPVAS VTSDGSDKPR DQKTLRRLAQ NREAARKSRL 60 RKKAYVQQLE E |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018633716.1 | 7e-42 | PREDICTED: transcription factor TGA2.2-like isoform X1 | ||||
Refseq | XP_018633718.1 | 7e-42 | PREDICTED: transcription factor TGA2.2-like isoform X1 | ||||
Refseq | XP_018633719.1 | 3e-42 | PREDICTED: transcription factor TGA2.2-like isoform X3 | ||||
Swissprot | P23923 | 6e-19 | HBP1B_WHEAT; Transcription factor HBP-1b(c38) | ||||
TrEMBL | A0A1S3ZJ10 | 3e-40 | A0A1S3ZJ10_TOBAC; transcription factor HBP-1b(C38)-like | ||||
STRING | XP_009627416.1 | 4e-41 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA22767 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 2e-15 | bZIP family protein |
Publications ? help Back to Top | |||
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