PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00753g02005.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 214aa    MW: 24656.7 Da    PI: 5.113
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00753g02005.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2476.2e-1581128455
                       AP2   4 kGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                               +GVr +k +g++ AeIrd +     + kr++lg+f taeeA + +   ++++eg
  Niben101Scf00753g02005.1  81 SGVRKRK-WGKYCAEIRDpF-----NkKRIWLGTFNTAEEASQVHQSKKLEFEG 128
                               8***999.**********55.....34**************9998888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.01579136IPR001471AP2/ERF domain
PfamPF008472.4E-780121IPR001471AP2/ERF domain
PRINTSPR003677.0E-78091IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-1481130IPR016177DNA-binding domain
SMARTSM003801.1E-1082147IPR001471AP2/ERF domain
CDDcd000183.48E-1882128No hitNo description
Gene3DG3DSA:3.30.730.105.5E-1882129IPR001471AP2/ERF domain
PRINTSPR003677.0E-7102118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MKSQPKFAEE NNEKQQREDE QIKIQRKIII KISDPDATES SSSEEEEQEK RQSRKQQPKL  60
TVHEIFQDKV NTTTFSSKLP SGVRKRKWGK YCAEIRDPFN KKRIWLGTFN TAEEASQVHQ  120
SKKLEFEGKL KMAKIAKTKK TISENSELET QTSDSSNGVE ELLMGQWIQI SDDKEVYFSL  180
KLGVPIVDNY GFLLGEFSEL DDLSISVCDV ENDL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764166.11e-131PREDICTED: ethylene-responsive transcription factor ERF118-like
RefseqXP_016510019.11e-131PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1S4D9Y51e-129A0A1S4D9Y5_TOBAC; ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1U7VGZ01e-129A0A1U7VGZ0_NICSY; ethylene-responsive transcription factor ERF118-like
STRINGXP_009764166.11e-130(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.16e-18ERF domain protein 11