PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf00508g09012.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 466aa MW: 50863.4 Da PI: 9.8932

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf00508g09012.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.5	1e-11	292	352	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +lkr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ l+k +l+s + Niben101Scf00508g09012.1 292 DLKRAKRILANRKSAARSKERKLRYISELEHKVQTLQTEATTLSAQVTVLQKDFTELTSLN 352 79***************************************************99999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.5E-17	290	354	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.013	292	355	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.2E-11	293	352	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-10	294	350	No hit	No description
SuperFamily	SSF57959	5.77E-11	294	347	No hit	No description
CDD	cd14703	6.15E-22	295	346	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence Send to blast
MYYLILMAQP NSKPNISHNF GGGASHTRSL SQPSIFSNNG LPPLSPFPHS ESSMASANSS 60 LKDTSMEEVD VSSRGPPFVS SSTRENTFQC SDSLPPKKGH RRSNSDVPLG FSAMIQSSLQ 120 LMPISGQGVL GGATLLGDPL RKKSGGEVVD KLSSYMNLEN MEALNSSITE DKVKDSIASR 180 TKLTGGNSSN RKAESVSKGT SIKRSADADI TRSTRHFRSL SMDSAVGSFH YGDESPKLPT 240 SLVNCPGKLS SSSSGNDNSD KINFDLGNGE FSEAEMRKIM ADERLAEIVV SDLKRAKRIL 300 ANRKSAARSK ERKLRYISEL EHKVQTLQTE ATTLSAQVTV LQKDFTELTS LNNELRFRLQ 360 AMEQQAQLRD CIYPSLPRGE RLYDPSTMVA FTLHEALTAE VHRLKFAMGE VKKEGRLANS 420 RAEQMAVKPK IFQTQWQQAS EIHQLSVAKP TTATKASATP ASALLV

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence Send to blast

MYYLILMAQP NSKPNISHNF GGGASHTRSL SQPSIFSNNG LPPLSPFPHS ESSMASANSS  60
LKDTSMEEVD VSSRGPPFVS SSTRENTFQC SDSLPPKKGH RRSNSDVPLG FSAMIQSSLQ  120
LMPISGQGVL GGATLLGDPL RKKSGGEVVD KLSSYMNLEN MEALNSSITE DKVKDSIASR  180
TKLTGGNSSN RKAESVSKGT SIKRSADADI TRSTRHFRSL SMDSAVGSFH YGDESPKLPT  240
SLVNCPGKLS SSSSGNDNSD KINFDLGNGE FSEAEMRKIM ADERLAEIVV SDLKRAKRIL  300
ANRKSAARSK ERKLRYISEL EHKVQTLQTE ATTLSAQVTV LQKDFTELTS LNNELRFRLQ  360
AMEQQAQLRD CIYPSLPRGE RLYDPSTMVA FTLHEALTAE VHRLKFAMGE VKKEGRLANS  420
RAEQMAVKPK IFQTQWQQAS EIHQLSVAKP TTATKASATP ASALLV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019223832.1	0.0	PREDICTED: transcription factor RF2a-like
TrEMBL	A0A314KW71	0.0	A0A314KW71_NICAT; Transcription factor rf2a
STRING	XP_009803494.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1265	24	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	4e-89	bZIP family protein