PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf00113g03002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 27524.8 Da PI: 8.4935 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.6 | 2.7e-12 | 107 | 148 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ gt eeAa+++++a+ Niben101Scf00113g03002.1 107 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 148 79**98..47*********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 9.559 | 84 | 161 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.2E-6 | 106 | 149 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 7.6E-5 | 106 | 163 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-8 | 107 | 151 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-6 | 109 | 152 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MVSIRRRKLL GLCSGRSSFL VPLPKFSENG HIAENRFLNN KHTSVHPMPS TDIDESKERT 60 AVKVVPGSSN GHASGSLIEQ TAQQFPGVKR RKRHRRKHFE NQEPCLMRGV YFKNMKWQAA 120 IKVDKKQIHL GTVGTQEEAA RLYDRAAFMC GREPNFEISE EEKQELRQFK WDEFLAFTRS 180 AITKKKTRRR SGVGARRKSE PLSSTLNSEE EEEEEEEEEG GDPESNGFSA SEDIEQDISL 240 S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 183 | 197 | KKKTRRRSGVGARRK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016461280.1 | 1e-153 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 | ||||
Swissprot | Q56XP9 | 4e-45 | ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040 | ||||
TrEMBL | A0A1S3Z9Z8 | 1e-151 | A0A1S3Z9Z8_TOBAC; ethylene-responsive transcription factor-like protein At4g13040 | ||||
STRING | XP_009758059.1 | 1e-149 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6246 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 6e-47 | ERF family protein |