PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf00073g05010.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 327aa    MW: 35269.2 Da    PI: 7.8235
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf00073g05010.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.71.9e-6521451148
                    DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 
                               ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+vedDGttyrkg+kp ++++++g s
  Niben101Scf00073g05010.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFTGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEDDGTTYRKGCKPVHHMDIIGGS 86 
                               5899********************************************************************************* PP

                    DUF822  86 asaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                               as+sp+ss+q         sp +sy++sp+sss+psp+s+  i + ++    +sl+p+l++ls+ ss
  Niben101Scf00073g05010.1  87 ASVSPCSSYQ--------LSPGASYNPSPASSSIPSPVSSHYIANVQNnsdpNSLIPWLKNLSSGSS 145
                               **********........788888888888888888888877655444567799*******998443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.3E-663141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FTGLRMYGNY KLPKHCDNNE VLKALCKEAG  60
WIVEDDGTTY RKGCKPVHHM DIIGGSASVS PCSSYQLSPG ASYNPSPASS SIPSPVSSHY  120
IANVQNNSDP NSLIPWLKNL SSGSSPSSSN FPHHLCIPGD SISAPVTPPS SSPTARTPRM  180
NDNWENPTAN STWIQHHYPF LPFSTPPSPG GRQTPPDSGW LSGVQTPQDG PSSPTFSLVS  240
SNPFGFKEPL SNGGSRMWTP GQSGTCSPAV GAGMDQTADI PMSDVISAEF AFGSNVKGVV  300
KPWEGERIHE ECVSDDLELT LGNSSTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019264686.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_019264687.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-127BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A314L3L90.0A0A314L3L9_NICAT; Bes1bzr1-like protein 4
STRINGXP_009800423.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-100BES1/BZR1 homolog 4