PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf00047g03012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 195aa MW: 22061.8 Da PI: 7.4629 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.8 | 3e-11 | 128 | 173 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L++l+P+ +k s a++L +Av++I+ Lq Niben101Scf00047g03012.1 128 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIRTLQ 173 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.954 | 122 | 172 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.62E-15 | 125 | 188 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.87E-10 | 126 | 177 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.9E-14 | 127 | 187 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.2E-12 | 128 | 178 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.9E-9 | 128 | 173 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010119 | Biological Process | regulation of stomatal movement | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence Send to blast |
MFRSIRRGIF TRQEVLSQIA EENEDVEGTS TEDGYRKSTH SYATASSFAM GSWEDNNSIM 60 FSVTPSKRAK HISDDIVNGL DDGETQFRFG LSQTALEMAS MDRLLHIPED SVPCKIRAKR 120 GCATHPRSIA ERERRTRISG KLKKLQDLVP NMDKQTSYAD MLDLAVQHIR TLQDQVQNLN 180 TELENCKCGC KKSSQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009803687.1 | 1e-133 | PREDICTED: transcription factor bHLH128-like isoform X2 | ||||
Refseq | XP_016489054.1 | 1e-133 | PREDICTED: transcription factor bHLH128-like isoform X2 | ||||
Swissprot | Q8H102 | 6e-60 | BH128_ARATH; Transcription factor bHLH128 | ||||
TrEMBL | A0A1S4BJN9 | 1e-132 | A0A1S4BJN9_TOBAC; transcription factor bHLH128-like isoform X2 | ||||
TrEMBL | A0A1U7YHV3 | 1e-132 | A0A1U7YHV3_NICSY; transcription factor bHLH128-like isoform X2 | ||||
STRING | XP_009803686.1 | 1e-132 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6455 | 23 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05805.1 | 3e-62 | bHLH family protein |
Publications ? help Back to Top | |||
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