PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Ctg15705g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 379aa MW: 42386.8 Da PI: 4.8829 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.8e-16 | 107 | 152 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 kGVr +k +g+++AeIrdps+ kr++lg+f+t + Aa+a++a + + Niben101Ctg15705g00001.1 107 PKGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFDTVKAAAEAYDAKKAE 152 79****99.**********964...3*******************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.83E-15 | 106 | 153 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 17.49 | 106 | 168 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.9E-10 | 106 | 152 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-6 | 107 | 118 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-19 | 108 | 153 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.6E-14 | 108 | 162 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.71E-19 | 108 | 148 | No hit | No description |
PRINTS | PR00367 | 1.7E-6 | 129 | 145 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MPCLPQELFD MMSNKERVND GCVGSVRKVR IIYDDPDATE SESENDDNTC NVVRIKRIVK 60 EINVSSASLE KKDFEKCPIR SSNKSLENKN RNGLENKRVQ IKSSSLPKGV RMRKWGKYAA 120 EIRDPSQGKR IWLGTFDTVK AAAEAYDAKK AEFDRRILSE RGKNLSSPQA PPECSTACSS 180 HPTNRTSSLY SHPSPSSVLD VPNSSAAAAV ECIDIPMKDK NPVPVLEVEQ PAVECIDILD 240 FNPKFEDQML YKDPLIEQGT ISNSLAEMTE FNITKKTKAR QPTIKICQKS TKGIEDRHLN 300 CTDQSITPPS ISAELNMMNF EETAVSGNNL KLLGFDENAL FGKDFSQTFD PYTDFVGLDS 360 NFLCCDGLEE FVYGMNEDF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019244158.1 | 0.0 | PREDICTED: uncharacterized protein LOC109224066 | ||||
TrEMBL | A0A1J6IKV8 | 0.0 | A0A1J6IKV8_NICAT; Ethylene-responsive transcription factor crf3 | ||||
STRING | XP_009791614.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12718 | 15 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 3e-17 | cytokinin response factor 4 |