PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Ctg00054g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 107aa MW: 11852.2 Da PI: 10.5256 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.1 | 1.9e-07 | 80 | 107 | 2 | 33 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfsl 33 y GVr + +g+Wv+eIr+p++ + r++l Niben101Ctg00054g00001.1 80 SYVGVRKRA-WGKWVSEIREPKK---KSRIWL 107 79****887.**********854...588886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.25E-12 | 79 | 107 | No hit | No description |
PROSITE profile | PS51032 | 12.286 | 80 | 107 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-11 | 80 | 107 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-6 | 80 | 107 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MAEPTTPNSE SESSSYNSCS LSSTISSSSV LIKNINSKNR LKRCREVAEE NDGQTNISKC 60 SNSSKKNGGN KTSDGSKHPS YVGVRKRAWG KWVSEIREPK KKSRIWL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009782186.1 | 3e-50 | PREDICTED: ethylene-responsive transcription factor TINY-like | ||||
Refseq | XP_016440909.1 | 3e-50 | PREDICTED: ethylene-responsive transcription factor TINY-like | ||||
TrEMBL | A0A1S3XM48 | 7e-49 | A0A1S3XM48_TOBAC; ethylene-responsive transcription factor TINY-like | ||||
TrEMBL | A0A1U7WY00 | 7e-49 | A0A1U7WY00_NICSY; ethylene-responsive transcription factor TINY-like | ||||
STRING | XP_009782186.1 | 1e-49 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 3e-13 | ERF family protein |