PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr8g091370.1
Common NameMTR_8g091370
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family EIL
Protein Properties Length: 446aa    MW: 51190.6 Da    PI: 4.9135
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr8g091370.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3389.93.5e-119223501353
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      +elkkrmwkd++ll++lk++ k+   d++      +++   e++rrkkmsraQD+iLkYM+k+m +c+aqGfvYgi+pekgkpv+g+s+sLr+W
  Medtr8g091370.1  22 DELKKRMWKDRILLQKLKGKGKKD--DQQ------NQQAKDEASRRKKMSRAQDSILKYMMKIMTICKAQGFVYGIVPEKGKPVTGSSESLREW 107
                      79*************999998873..233......344568***************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.- CS
             EIN3  95 Wkekvefdrngpaaiskyqaknlilsgessl.qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.l 186
                      Wke+v+f +n+paa+sky +  l+ ++++       ss+ h l +lqDTtlgSLLsalmqhc ppqrrfple g++pPWWP+G+e+wwg++g l
  Medtr8g091370.1 108 WKEQVKFSQNAPAAVSKYLPSSLLENQQELElLDPISSYMHLLYDLQDTTLGSLLSALMQHCVPPQRRFPLEIGLAPPWWPNGTEQWWGQQGgL 201
                      ******************998888777665533358999*****************************************************99 PP

                      -TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXX CS
             EIN3 187 skdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceq 280
                      s+++g+ppykkphdlkkawkvsvL+a ikh+sp+++++r+l+ qsk lq+km+ak+s+++++v+nqe+++++            ++ +++s+e 
  Medtr8g091370.1 202 SEQHGPPPYKKPHDLKKAWKVSVLAAIIKHLSPDVDKVRRLVTQSKTLQHKMTAKDSATWSKVMNQEQALLH----------LTEKCLKISEEG 285
                      99999**************************************************************98762..........244456666664 PP

                      XXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
             EIN3 281 kedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                      +  + +k        +  ++ +++  ++krk +++ +a     +v + cq +++++s+  ++f+dk+s+ ++e
  Medtr8g091370.1 286 ESSSSTK--------HDLNRLEKCGSTEKRKGEFDLDADFDFDKVLYSCQYAECPQSDLCMGFSDKSSRVNHE 350
                      4332222........3334455678899*****************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.6E-11222268No hitNo description
Gene3DG3DSA:1.10.3180.102.8E-65143273IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.96E-56147272IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MVEITEEIES FDQQKEEEID YDELKKRMWK DRILLQKLKG KGKKDDQQNQ QAKDEASRRK  60
KMSRAQDSIL KYMMKIMTIC KAQGFVYGIV PEKGKPVTGS SESLREWWKE QVKFSQNAPA  120
AVSKYLPSSL LENQQELELL DPISSYMHLL YDLQDTTLGS LLSALMQHCV PPQRRFPLEI  180
GLAPPWWPNG TEQWWGQQGG LSEQHGPPPY KKPHDLKKAW KVSVLAAIIK HLSPDVDKVR  240
RLVTQSKTLQ HKMTAKDSAT WSKVMNQEQA LLHLTEKCLK ISEEGESSSS TKHDLNRLEK  300
CGSTEKRKGE FDLDADFDFD KVLYSCQYAE CPQSDLCMGF SDKSSRVNHE SHCSYRTEQG  360
HVPFHDFLSD DWLNMDIAGD DVNESGEIVD MTLEDYGNFW LNSMQDLELH MGVDLERDNM  420
DLNQNPAQET TLSDEATSVW DLPYD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-561452711126Protein ETHYLENE INSENSITIVE 3
4zds_B1e-561452711126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr8g091370.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU4439640.0GU443964.1 Trifolium repens clone BAC 88n22 myo-inositol-1-phosphate synthase, bristled-like protein, ethylene insensitive-like protein, bZIP transcription factor, acyl-coA oxidase, and dehydration responsive element binding protein genes, complete cds; and unknown genes.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003630065.20.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-134EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLG7LAE20.0G7LAE2_MEDTR; Ethylene insensitive protein
STRINGAET045410.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-131EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]
  3. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]