PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g093010.1
Common NameMTR_7g093010
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family G2-like
Protein Properties Length: 360aa    MW: 41205.3 Da    PI: 7.9283
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g093010.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like77.12.3e-24213267155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k r+rWt++LHe+F+  v++LGG+ekA Pk+il++mk + L+++hvkSHLQk R+
  Medtr7g093010.1 213 KRRVRWTEDLHESFMIIVDHLGGPEKAKPKAILDMMKSNLLSISHVKSHLQKCRS 267
                      68**************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.63E-12212269IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-21213269IPR009057Homeodomain-like
TIGRFAMsTIGR015578.4E-20213267IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MYQHWSKMYG TQWESYIGIS NLVKVVGSDQ IVGSEQMSFE PIKSPCNNIV TTNFQGQTPH  60
EGFGAVSVAK IKNHGSFQAE EYYDEDEIEV PGWCFDQFPK ITDPPMLNCQ AHGGDNFTNS  120
LYSVDESLLS NSADSHNSSE EEYSNFQSGN MSFYDHFPKK HNELFRNDAS IDENPLEISF  180
QRTKSGSSTK SQKQTPQLYG MCATSNRKAP TCKRRVRWTE DLHESFMIIV DHLGGPEKAK  240
PKAILDMMKS NLLSISHVKS HLQKCRSTIR VGVHKALQEK PEEGHRTDRV ADLQLKILKQ  300
IEESQQLHLE VRKSISQQLE TQRKLQTLIE QHGNKLKLMQ KERTNQRKSW TQRERTVPK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g093010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003625243.20.0myb family transcription factor PHL5 isoform X2
TrEMBLG7KVB90.0G7KVB9_MEDTR; Myb-like DNA-binding domain, shaqkyf class protein
STRINGAES814610.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144901016
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.12e-27G2-like family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]