PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr4g088125.1
Common NameMTR_4g088125
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family VOZ
Protein Properties Length: 477aa    MW: 52874.4 Da    PI: 5.6607
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr4g088125.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ438.58.7e-1352004161217
              VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaae 94 
                      pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkd+llf+alsak+qgk+vgipecegaatakspwna+e
  Medtr4g088125.1 200 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPE 293
                      89******************************************************************************************** PP

              VOZ  95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelk 188
                      lfdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqv++efgglkrsyymdpqp+++fewhlyeyei+++d +alyrlelk
  Medtr4g088125.1 294 LFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDVCALYRLELK 387
                      ********************************************************************************************** PP

              VOZ 189 lvdekksakgkvskdsladlqkklgrlta 217
                      lvd+kk++k+++++ds+adlqk++++l+a
  Medtr4g088125.1 388 LVDGKKNSKARITNDSVADLQKQMVKLSA 416
                      ***************************87 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MKKGSKRSCK SASHSLFKDK AKNRVDDLQL MFLDLQFARK ESRTVDAAVL EEQVHQMLRE  60
WKSELNEPSP ASSLQQGGSL GSYSTDICRL LQLCEEEDDA SSPLTAPKPE PNDQALQAGG  120
NVIFQEGQQQ HDFPLVDERK HSTSGVQNVA ANQDGAALEY HQFDLQQDFD HNLYAGFNGT  180
GYCEEDAVPL ISSYLPSVCP PPSAFLGPKC ALWDCPRPAQ GLDWCQDYCS SFHAALALNE  240
GPPGMAPVLR PGGIGLKDNL LFSALSAKAQ GKDVGIPECE GAATAKSPWN APELFDLSVL  300
EGETIREWLF FDKPRRAFES GNRKQRSLPD YSGRGWHESR KQVINEFGGL KRSYYMDPQP  360
LNHFEWHLYE YEISKCDVCA LYRLELKLVD GKKNSKARIT NDSVADLQKQ MVKLSAEFPP  420
DNKRPAKGRA KINAKVGMGA VYPASHRMAP LSGTYEYGLA APYDYLVENT GDYYGT*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.69280.0leaf| pod| root
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr4g088125.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1356160.0BT135616.1 Medicago truncatula clone JCVI-FLMt-3E8 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013456921.10.0transcription factor VOZ1
RefseqXP_024637757.10.0transcription factor VOZ1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A072UMQ90.0A0A072UMQ9_MEDTR; Putative transcription factor VOZ family
STRINGGLYMA07G32374.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14983494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  4. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  5. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]