PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr3g057070.1
Common NameMTR_024s0029, MTR_024s0031, MTR_3g057070
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family ERF
Protein Properties Length: 65aa    MW: 7777.2 Da    PI: 10.8569
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr3g057070.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.84.9e-073455223
              AP2  2 gykGVrwdkkrgrWvAeIrd.ps 23
                     +y+GVr +k +gr+ AeIrd ++
  Medtr3g057070.1 34 RYRGVRKRK-NGRYNAEIRDpWK 55
                     69****999.8*********773 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-63455IPR001471AP2/ERF domain
PROSITE profilePS510328.9133464IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    Send to blast
MEESTYQTKP NPIAKPSCKM KFKQLQNNIP KEIRYRGVRK RKNGRYNAEI RDPWKKWVCM  60
VIHL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr3g057070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLG7ZVF24e-40G7ZVF2_MEDTR; Ethylene response factor
STRINGAES705506e-41(Medicago truncatula)
STRINGAES831906e-41(Medicago truncatula)
STRINGAES831926e-41(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.12e-10ethylene response factor 8
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]