PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr2g099050.1
Common NameMTR_2g099050
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 430aa    MW: 46629.6 Da    PI: 6.2933
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr2g099050.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42e-10223281563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+   + l se+
  Medtr2g099050.1 223 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTSGLNSEN 281
                      9***********************************************99999888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-15219283IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.99221284IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.88E-11223274No hitNo description
Gene3DG3DSA:1.20.5.1702.5E-8223279No hitNo description
PfamPF001702.0E-9223281IPR004827Basic-leucine zipper domain
CDDcd147037.11E-27224273No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MEKDKSLGLG GGFPPPSGRY PGYSPSGSGF NVKSEPPSSS YPPLVPGTSS DSSGFSHDIS  60
KMSDNPPRNR GHRRAHSEIL TLPDDISFDS DLGVVGGADG PSFSDDTEED LLSMYLDMDK  120
FNSSSATSNF QMGEGSNAAG ASGLAPMSVG QTSGGGTSSG ENMAVGTTNE RPRIRHQHSQ  180
SMDGSTTIKP EMLVSGSDDM SAADSKKAMS AAKLAELALI DPKRAKRIWA NRQSAARSKE  240
RKMRYIAELE RKVQTLQTEA TSLSAQLTLL QRDTSGLNSE NSELKLRLQT MEQQVHLQDA  300
LNDALKEEIT HLKVLTGQAM PPNGGPMNLA SFGGGQQFYP NNNHAMHTLL AAQQFQQLQI  360
HPQKQQQHQF QQQIQQQQQI QQQQMQQQQM QQQQQEQQQS GDLKMRATTP PCPKDNPSSD  420
VNPSATKDC*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.234490.0root
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants.
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr2g099050.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003597529.10.0probable transcription factor PosF21
SwissprotQ040881e-150POF21_ARATH; Probable transcription factor PosF21
TrEMBLG7IHV80.0G7IHV8_MEDTR; BZIP transcription factor
STRINGAES677800.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-137bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]
  3. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]