PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr2g045700.1
Common NameMTR_2g045700
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 272aa    MW: 30384.5 Da    PI: 5.1559
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr2g045700.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.46.3e-13186246363
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+++er++ +NR +A+rs  +K++e+eeL +k+++L+ eN+ L+++l el+ ++ +l++e+
  Medtr2g045700.1 186 EIRKERKRLSNRKSAKRSKIKKQKECEELCQKIDTLKDENSVLAQTLAELSMKYLELTNEN 246
                      789****************************************************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-8181242No hitNo description
SMARTSM003384.1E-11184248IPR004827Basic-leucine zipper domain
PfamPF001704.9E-10186246IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.243186249IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.97E-8187243No hitNo description
CDDcd147021.21E-14189239No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MGKKESNPFG RPYNFSAPQD VSKSSNSKQT YDTTLGYNYA GENNALLQCD PTDLSYNPHV  60
AEDAALAFSE MVHKRNPDFN KLFARNSEPV LSLMTGESRE YANQSSASKH DRDGTSRREA  120
SGSKRSTDGD QDDSNKDSPS SMKQRSNIII GDENPSGLAQ NLVTVVKESD TDIDVDAQLK  180
NMEGDEIRKE RKRLSNRKSA KRSKIKKQKE CEELCQKIDT LKDENSVLAQ TLAELSMKYL  240
ELTNENDSIK EELVKEYGQE SIADLLHMKP T*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1200206KRSKIKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr2g045700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2340953e-89AC234095.2 Medicago truncatula strain A17 clone WTSI_1018-83A6, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024632767.10.0G-box-binding factor 1
TrEMBLG7ISU20.0G7ISU2_MEDTR; BZIP transcription factor
STRINGAES657080.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149401013
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]