PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr1g074290.1
Common NameMTR_1g074290
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family ERF
Protein Properties Length: 162aa    MW: 17933.1 Da    PI: 8.2086
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr1g074290.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.11e-131666255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GV + + +g+++A Irdp+    r  ++ ++g f ta+eAa+a+++a+ ++ g
  Medtr1g074290.1 16 QYRGVLYTP-WGKFAAGIRDPN----RegRKLWIGCFHTADEAARAYDRAAYNMSG 66
                     69*******.**********83....235***********************9977 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.15E-191675IPR016177DNA-binding domain
SMARTSM003801.2E-221680IPR001471AP2/ERF domain
PROSITE profilePS5103219.7041674IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.9E-251676IPR001471AP2/ERF domain
PRINTSPR003676.9E-101728IPR001471AP2/ERF domain
PfamPF008478.1E-91766IPR001471AP2/ERF domain
PRINTSPR003676.9E-105676IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MSGSRGGAKN NGGPVQYRGV LYTPWGKFAA GIRDPNREGR KLWIGCFHTA DEAARAYDRA  60
AYNMSGSSAI LNFPNEYNMA SHAGSTSSNN VFKFEYLDLD NWLDLLEVIS SHIFREGNRC  120
ADRLAALGLS VVGAVWLSVL PSDLQHEFYA DRYGMPRFRF P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-262983111Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr1g074290.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024630809.18e-58ethylene-responsive transcription factor 14
SwissprotQ9LSX02e-26ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLA0A072VM821e-116A0A072VM82_MEDTR; AP2 domain class transcription factor
STRINGBra027493.1-P2e-27(Brassica rapa)
STRINGGLYMA10G00990.12e-27(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.15e-20Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]
  2. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]