PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr1g023690.2
Common NameMTR_1g023690
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 556aa    MW: 61868.6 Da    PI: 8.4701
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr1g023690.2genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.3e-11388448464
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                       kr++r   NR +A rs +RK ++i eLe+kv++L++e ++L  +  +l+   ++ kse++
  Medtr1g023690.2 388 PKRAKRILANRQSAARSKERKMKYISELEQKVQTLQTETTTLSTQFTKLQMDHQEAKSENK 448
                      59************************************************99999999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-13385449IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.875387450IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-10389437No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-11389441No hitNo description
PfamPF001703.7E-10389448IPR004827Basic-leucine zipper domain
CDDcd147033.12E-14390419No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 556 aa     Download sequence    Send to blast
MHERMERFDQ KKVHAFGSPK PPIQLNPMPI NQINQMGFPE NHKSSGFGIP PSYPNPNTSL  60
SPKPSSPYPQ FMPPQSQTHS RSLSQPTFLS LDSFSLPPLS PSPSPSPYHL SSNPFSESGS  120
KDVSMEDGLG FGAHHVPSPN RGHAVQHGHC LPPRKGHRRS SSDSPLGISE FVNSEPQLVT  180
PQLVSVSDRR NLVSGGEKPG YEKPIQLVLK DRDCVDGFRG ESFDGRKENV GAEMDDLFSA  240
YMNLENMHNM SFSGMEDSRT SGSKTVESSD NEAESRVNVK GIGAKGASSS CSDERREGVK  300
RSSNGDIAPS GRHRRSYSLD SSIENFNIED HKLPPLQGRP GQHSPSNSMD GSKTPEISME  360
FGNGEFSSQE MKKIMENDKL AEIAAADPKR AKRILANRQS AARSKERKMK YISELEQKVQ  420
TLQTETTTLS TQFTKLQMDH QEAKSENKEY KLRLQSLEQQ SQLKDALNET LNAEVRRLRR  480
TVADLGGEST LSGLMVRQLA INQQMFQPQH QQPNQLRNFQ PQNSVSQEET QTQSQQHIQR  540
NHEFQSKHQN GKTTA*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.42000.0leaf| pod| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr1g023690.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1242160.0AC124216.27 Medicago truncatula clone mth2-34o22, complete sequence.
GenBankAC1743150.0AC174315.4 Medicago truncatula clone mth2-165c4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003589390.10.0uncharacterized protein LOC11428070
RefseqXP_024631191.10.0uncharacterized protein LOC11428070
TrEMBLG7I6G40.0G7I6G4_MEDTR; BZIP transcription factor
STRINGAES596410.0(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-63bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]