PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr0014s0410.1 | ||||||||
Common Name | MTR_0014s0410 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | bZIP | ||||||||
Protein Properties | Length: 149aa MW: 17044.4 Da PI: 9.7036 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 19.9 | 1.7e-06 | 1 | 34 | 28 | 61 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 28 ieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +++Le++v eL +e++aL+ ++eel++ ++l+ Medtr0014s0410.1 1 MDQLEQEVHELRKEMTALRAKVEELTNRLSSLTV 34 68*************************9999975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-4 | 2 | 32 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MDQLEQEVHE LRKEMTALRA KVEELTNRLS SLTVTKDLPQ FQRRPQPPRQ TSYTQQPRQQ 60 APQQSNPQNQ ARRASYDPIP IKYAELLPIL LEKNLVQTRA PPRVPDKLPA GYRSDLSCAF 120 HQGAPGHDIE HCYALKAEIQ KLVQDKKN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr0014s0410.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC140914 | 0.0 | AC140914.20 Medicago truncatula clone mth2-18h17, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024635695.1 | 4e-56 | alpha/beta-gliadin-like | ||||
TrEMBL | A0A072TKS7 | 1e-103 | A0A072TKS7_MEDTR; Uncharacterized protein | ||||
STRING | AES60814 | 2e-43 | (Medicago truncatula) |
Link Out ? help Back to Top | |
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Phytozome | Medtr0014s0410.1 |
Entrez Gene | 25479617 |
Publications ? help Back to Top | |||
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