PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 189333 | ||||||||
Common Name | MICPUCDRAFT_51388 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas; Micromonas pusilla
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Family | bZIP | ||||||||
Protein Properties | Length: 192aa MW: 20897.1 Da PI: 7.8474 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.3 | 1.6e-08 | 34 | 71 | 3 | 40 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 e +r rr +NRe+ArrsR+RK++++ eLe+ +L+ 189333 34 EARRLRRVKSNRESARRSRARKQQRLVELERSTRVLDD 71 57899**************************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-6 | 29 | 84 | No hit | No description |
SMART | SM00338 | 1.3E-8 | 32 | 96 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.358 | 34 | 97 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.8E-6 | 34 | 71 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.16E-7 | 36 | 89 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 39 | 54 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MIDHLDPPVN VSPDATSDEH ENHENHHGED DPDEARRLRR VKSNRESARR SRARKQQRLV 60 ELERSTRVLD DDVRRTRQNV ALMSSVMYHV VEENRQLESE CAAIGRQILA MNEQAVAKAR 120 ADAIAQGAMA RRGGGTTTTG TGASGGAGAG MIGRVDSPKS PHRIRRAPSL TVVREEEAEY 180 AFHAGGTTSA A* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 48 | 55 | RRSRARKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003061557.1 | 1e-136 | predicted protein | ||||
TrEMBL | C1N1F9 | 1e-135 | C1N1F9_MICPC; Predicted protein | ||||
STRING | XP_003061557.1 | 1e-136 | (Micromonas pusilla) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP15251 | 2 | 2 |
Link Out ? help Back to Top | |
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Phytozome | 189333 |
Entrez Gene | 9687248 |
Publications ? help Back to Top | |||
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