PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0467s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | WRKY | ||||||||
Protein Properties | Length: 217aa MW: 23758.5 Da PI: 8.462 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.9 | 2.3e-29 | 132 | 189 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK+vk+s +prsYYrCt+ +Cp++k+v+rs+edp++ ++tY+g+H ++ Mapoly0467s0001.1.p 132 DDGYTWRKYGQKDVKKSSYPRSYYRCTTLTCPSRKRVQRSDEDPSYYDVTYQGHHICP 189 8******************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 23.204 | 126 | 191 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.24E-26 | 127 | 190 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.1E-28 | 127 | 189 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.5E-33 | 131 | 190 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.7E-25 | 132 | 189 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MATGGSKAQD QLVAKAGNLS LLLSGDDCHT PGRMQFTSPT TSPCDTPLSS SGLSEGGSPV 60 RPNQVAPDSD EDTVGNLSRR QSHDVSTSAT DPDLSDKPAL PKKRKYFPKG ILYQTKQRAI 120 GTGDPANYGP PDDGYTWRKY GQKDVKKSSY PRSYYRCTTL TCPSRKRVQR SDEDPSYYDV 180 TYQGHHICPL LEQRTWHIGL APSHIAIHEL LARCCI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-15 | 132 | 186 | 18 | 72 | Probable WRKY transcription factor 4 |
2lex_A | 4e-15 | 132 | 186 | 18 | 72 | Probable WRKY transcription factor 4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6VYV8 | 1e-158 | A0A2R6VYV8_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 7e-23 | WRKY DNA-binding protein 48 |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0467s0001.1.p |