PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0257s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | NF-YB | ||||||||
Protein Properties | Length: 68aa MW: 7304.2 Da PI: 9.0653 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 29.9 | 1.3e-09 | 31 | 66 | 1 | 36 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvq 36 vreqdrfl i+n+s i+kkv+ +naki+ ake+v+ Mapoly0257s0002.1.p 31 VREQDRFLLISNISIIIKKVFTGNAKIAMYAKEIVH 66 69*******************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.20.10 | 5.8E-7 | 9 | 65 | IPR009072 | Histone-fold |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence Send to blast |
MAVTSSSGSQ YNSHSDDFGN AGGGDRDKSN VREQDRFLLI SNISIIIKKV FTGNAKIAMY 60 AKEIVHL* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024369282.1 | 1e-18 | nuclear transcription factor Y subunit B-1-like isoform X1 | ||||
Refseq | XP_024369283.1 | 5e-19 | nuclear transcription factor Y subunit B-3-like isoform X2 | ||||
TrEMBL | A0A2R6VZD3 | 9e-41 | A0A2R6VZD3_MARPO; Uncharacterized protein | ||||
STRING | PP1S25_10V6.1 | 5e-18 | (Physcomitrella patens) |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0257s0002.1.p |