PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0213s0014.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

HB-other

Protein Properties

Length: 1567aa MW: 177689 Da PI: 8.9982

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0213s0014.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.4	2.5e-08	1077	1109	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ ++e LA+ +gLt +qV++WF N R + Mapoly0213s0014.1.p 1077 HPYPKDVDKESLASATGLTRSQVSNWFINARVR 1109 89*****************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	11.758	1050	1113	IPR001356	Homeobox domain
SMART	SM00389	4.9E-9	1053	1117	IPR001356	Homeobox domain
CDD	cd00086	1.32E-8	1053	1114	No hit	No description
SuperFamily	SSF46689	1.84E-15	1054	1120	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.6E-25	1056	1119	IPR009057	Homeodomain-like
Pfam	PF05920	6.3E-16	1070	1109	IPR008422	Homeobox KN domain
SuperFamily	SSF51161	7.9E-9	1241	1386	IPR011004	Trimeric LpxA-like
Gene3D	G3DSA:2.160.10.10	1.7E-11	1242	1387	No hit	No description
SuperFamily	SSF51161	6.64E-5	1396	1478	IPR011004	Trimeric LpxA-like
Gene3D	G3DSA:2.160.10.10	3.5E-6	1396	1478	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0048481	Biological Process	plant ovule development
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0009506	Cellular Component	plasmodesma
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1567 aa Download sequence Send to blast
MKSEGDPDAL SERTSRFLLT GILGEKVVPL TKLLEDITAE SNEETAYSHL LRKGKATPAC 60 LNQIRSSANR PMCPAERRGS LVQKEGHCLD SQTHCLDSQT ESGFPAKHQP AKSAGRGGGL 120 PTHDSDHGKR FHARGDPEQH IHQSQEVRPS ITSRSDAREF QTERKVATED QGRHGEHQTQ 180 RQPLRRDLNV QNEGISVTPA AHQQAGREAF QGGCSTSTQH NEEIHRKCQK QASADQDRGQ 240 HINAEFLAVL MAAHYQEAYL KASLAAKYLQ EYQNAKQSQH LPAGSQKAHV AERFSEAYQV 300 ALELSQLPVN PESQKSLMEE FYTNLSAAPE AASGGKFSAS PPTPYLHPFY EGSATPQGGS 360 FPAQCEPSHG PLVPSSPLPS PPTGPEQDRS DSTGGQSQLP HGLGQTFLHF SQLPSTAEHA 420 KTVTEEGSDR VIDERDQKPA ERSEVFPHHP HMSFACQGKV MTRGAKVESE APFVAIFPLY 480 KPPPQPQPKP EPHYGGNVGK QVVQETGDHA RVMTSQGPHW LYSSGPSIAQ CQSRPPNETK 540 DARIQREQEA PPGTQGVGSE RETYCDGSDG KRSTGFKRWS APQNGDGRAQ NPIQFAVANQ 600 APQGDGPPHQ RAPPHPLTFV DLGDASEDGE SVQTPLPEDK ESDSEPESER FAGQPRDEDT 660 EVGARVERNV EESKSGAETL QESGDDDAGE LEDEEREREG EGEGEVKSER RFYFFDFTKI 720 CDNLYPPDVT TKMLKDFGLR YYPMRFREDE KIREIEALFR EVLSFSRPKN VPEIPIVPFD 780 FLRSQRYFTE MAQRPAARKS ASARSSQSTA AGTSHPAAQL WAALIAQRAR AFRRECSIRI 840 ENQGIDLADS FTADQLDYKP VHRGRSRDVM AWLRKPRSRG VTLHDRKKMF RAYIDEIDDW 900 YYEYRSTLEN INDETDDSFG HFIGNIYTEY PLMELSRRLR RYRDTFLEHL VCVKKVLGDS 960 TAVPDFDKNI RDRLIACRVR AAKRMARKAL MVIRRAHAPY KKRMINGCHK MIVKLEPKQE 1020 NRIAEAVRIA GTNNGPRRQQ RMYSGRLNLN STWRPQRGLP DRAVSVLKAW LFTNFLHPYP 1080 KDVDKESLAS ATGLTRSQVS NWFINARVRV WKPMIEAMYL MDFPEDRHRF ITMSRARKVD 1140 HGQELGDRKP GTSRSRFFPC VDGRTRRSRK RQCIYRPASH SLALGSRVLP SFLRHAQASS 1200 RMRHQASRAF APYSREMLAQ FLRNASVWRA QLGESRQNRA EVEHRFAIQG RAEVGNRFTI 1260 QNRTQVEPKF TIQNRAQVEP RLTVQDRAQV ESRFPIQNRA QVEPRLIVQD RAQVEPRFPT 1320 QNRAQVEPRV TVQDRTQVEH SFIIQNQGQV EPRLTVQDRD QVETRFPIQN RAQVEPSVTV 1380 QDRAQVEHSF ISQNRAPVEP RFTIQDRAQA EPKFTFPSQA KVEPRLTIQD RAQLEPRFTI 1440 QDRAQVGTRF TIQDRAPVET RFSIQDRAKV DTTLTIKDLR AELEPRLTSE KIDYDNHISL 1500 ELQLGSERTK ARPESTGPRL RFQDGRLLSE RMRIGHHTEP PKGEIPMDIL KFEDLERIRK 1560 GKGIVE*

Sequence ? help Back to Top

Protein Sequence Length: 1567 aa Download sequence Send to blast

MKSEGDPDAL SERTSRFLLT GILGEKVVPL TKLLEDITAE SNEETAYSHL LRKGKATPAC  60
LNQIRSSANR PMCPAERRGS LVQKEGHCLD SQTHCLDSQT ESGFPAKHQP AKSAGRGGGL  120
PTHDSDHGKR FHARGDPEQH IHQSQEVRPS ITSRSDAREF QTERKVATED QGRHGEHQTQ  180
RQPLRRDLNV QNEGISVTPA AHQQAGREAF QGGCSTSTQH NEEIHRKCQK QASADQDRGQ  240
HINAEFLAVL MAAHYQEAYL KASLAAKYLQ EYQNAKQSQH LPAGSQKAHV AERFSEAYQV  300
ALELSQLPVN PESQKSLMEE FYTNLSAAPE AASGGKFSAS PPTPYLHPFY EGSATPQGGS  360
FPAQCEPSHG PLVPSSPLPS PPTGPEQDRS DSTGGQSQLP HGLGQTFLHF SQLPSTAEHA  420
KTVTEEGSDR VIDERDQKPA ERSEVFPHHP HMSFACQGKV MTRGAKVESE APFVAIFPLY  480
KPPPQPQPKP EPHYGGNVGK QVVQETGDHA RVMTSQGPHW LYSSGPSIAQ CQSRPPNETK  540
DARIQREQEA PPGTQGVGSE RETYCDGSDG KRSTGFKRWS APQNGDGRAQ NPIQFAVANQ  600
APQGDGPPHQ RAPPHPLTFV DLGDASEDGE SVQTPLPEDK ESDSEPESER FAGQPRDEDT  660
EVGARVERNV EESKSGAETL QESGDDDAGE LEDEEREREG EGEGEVKSER RFYFFDFTKI  720
CDNLYPPDVT TKMLKDFGLR YYPMRFREDE KIREIEALFR EVLSFSRPKN VPEIPIVPFD  780
FLRSQRYFTE MAQRPAARKS ASARSSQSTA AGTSHPAAQL WAALIAQRAR AFRRECSIRI  840
ENQGIDLADS FTADQLDYKP VHRGRSRDVM AWLRKPRSRG VTLHDRKKMF RAYIDEIDDW  900
YYEYRSTLEN INDETDDSFG HFIGNIYTEY PLMELSRRLR RYRDTFLEHL VCVKKVLGDS  960
TAVPDFDKNI RDRLIACRVR AAKRMARKAL MVIRRAHAPY KKRMINGCHK MIVKLEPKQE  1020
NRIAEAVRIA GTNNGPRRQQ RMYSGRLNLN STWRPQRGLP DRAVSVLKAW LFTNFLHPYP  1080
KDVDKESLAS ATGLTRSQVS NWFINARVRV WKPMIEAMYL MDFPEDRHRF ITMSRARKVD  1140
HGQELGDRKP GTSRSRFFPC VDGRTRRSRK RQCIYRPASH SLALGSRVLP SFLRHAQASS  1200
RMRHQASRAF APYSREMLAQ FLRNASVWRA QLGESRQNRA EVEHRFAIQG RAEVGNRFTI  1260
QNRTQVEPKF TIQNRAQVEP RLTVQDRAQV ESRFPIQNRA QVEPRLIVQD RAQVEPRFPT  1320
QNRAQVEPRV TVQDRTQVEH SFIIQNQGQV EPRLTVQDRD QVETRFPIQN RAQVEPSVTV  1380
QDRAQVEHSF ISQNRAPVEP RFTIQDRAQA EPKFTFPSQA KVEPRLTIQD RAQLEPRFTI  1440
QDRAQVGTRF TIQDRAPVET RFSIQDRAKV DTTLTIKDLR AELEPRLTSE KIDYDNHISL  1500
ELQLGSERTK ARPESTGPRL RFQDGRLLSE RMRIGHHTEP PKGEIPMDIL KFEDLERIRK  1560
GKGIVE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	874	887	KPRSRGVTLHDRKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6W049	0.0	A0A2R6W049_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP133	16	172

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	7e-32	TALE family protein

Link Out ? help Back to Top
Phytozome	Mapoly0213s0014.1.p