PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0183s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | B3 | ||||||||
Protein Properties | Length: 183aa MW: 21409 Da PI: 10.0448 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.1 | 4.1e-10 | 55 | 135 | 8 | 95 |
-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 8 sdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +v+ ++ l +f++ + g++ +++ ++d++ sW vk+ +++++ ++++GW +Fvka g ++g + F+++ s ++l+v+ Mapoly0183s0010.1.p 55 TSVHHCFLMGLDPTFCRLFlpGED--TNV-TLIYDKDETSWPVKF-FSRRR---LFSGGWIKFVKAYGFEVGQLLNFEVE--SPKTLRVR 135 556666677888999977764333..333.34488**********.33333...79**********************54..56655665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 2.7E-12 | 46 | 138 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 4.9E-14 | 46 | 138 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.31E-12 | 46 | 138 | No hit | No description |
PROSITE profile | PS50863 | 9.545 | 48 | 140 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 3.8E-6 | 49 | 140 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MDSENFKMNV RRKTRAQLTK ESVFLKRDAW NHLEKIHTFP CLIKGPNIFR VMDKTSVHHC 60 FLMGLDPTFC RLFLPGEDTN VTLIYDKDET SWPVKFFSRR RLFSGGWIKF VKAYGFEVGQ 120 LLNFEVESPK TLRVRSYDNL GPNCVRSREQ IEAKIRRPKP DPIVMKVVEY PEGPRLCIIP 180 RD* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6W1T8 | 1e-133 | A0A2R6W1T8_MARPO; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 1e-08 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0183s0010.1.p |