PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Mapoly0166s0010.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 444aa MW: 49314.3 Da PI: 6.528 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.3 | 2.9e-21 | 78 | 127 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+t+eeAa+a+++a+ +++g Mapoly0166s0010.2.p 78 RYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTPEEAARAYDRAAINFRG 127 8********.**********94....45***********************9997 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.34E-34 | 77 | 137 | No hit | No description |
SMART | SM00380 | 3.5E-36 | 78 | 141 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.6E-32 | 78 | 137 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.24E-22 | 78 | 137 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 4.7E-15 | 78 | 127 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.948 | 78 | 135 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-11 | 79 | 90 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-11 | 101 | 117 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071497 | Biological Process | cellular response to freezing | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 444 aa Download sequence Send to blast |
MVFSKQLRQS DVHEFPSQTW NLRAEESTGS DWGLSSDSGK SSILSTSFTP RLEESEKPVP 60 AEDSSAASYT EEAPKRKRYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFDT PEEAARAYDR 120 AAINFRGLRA KLNFQDSRDV LAVSGAATQA EASASRRSPP KSKAAAAIAI AASRAATPES 180 VLVSRAQTQS IPQQSPPPAH PERLGVEEPA YYPSQISYPA HFRSSTVGQQ QQLQLEEQRK 240 QLEQQRMRKS QELLQGIFSQ YMSSASQSMS LLSSGAGPSS HGSSGDHSSA LMSSGAHTST 300 IMTTEATRDD RAANPAVWMQ QQQYVQEQQQ SSSSANVFQN SQHEWNPVMQ QQQQQQQQQR 360 QVPTMMNQLV DQQHQQLLFQ RDQQPAPQEL SFEQIFEQGG PNDWGLIDPV DLCELNNSSV 420 KELTGFNVWN MYPQQDRPAS SGS* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 7e-21 | 77 | 134 | 1 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6W3H3 | 0.0 | A0A2R6W3H3_MARPO; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13330.1 | 2e-30 | related to AP2 6l |
Link Out ? help Back to Top | |
---|---|
Phytozome | Mapoly0166s0010.2.p |