PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0166s0010.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 556aa    MW: 61578.6 Da    PI: 6.2055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0166s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.9e-21190239255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+t+eeAa+a+++a+ +++g
  Mapoly0166s0010.1.p 190 RYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTPEEAARAYDRAAINFRG 239
                          8********.**********94....45***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.02E-34189249No hitNo description
Gene3DG3DSA:3.30.730.101.0E-31190249IPR001471AP2/ERF domain
PROSITE profilePS5103224.948190247IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-22190249IPR016177DNA-binding domain
PfamPF008476.4E-15190239IPR001471AP2/ERF domain
SMARTSM003803.5E-36190253IPR001471AP2/ERF domain
PRINTSPR003671.7E-11191202IPR001471AP2/ERF domain
PRINTSPR003671.7E-11213229IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 556 aa     Download sequence    Send to blast
MIMCKNPVGV LGAGGESERN LRVSEFDTPA YVPSGYLRNQ YNQQLLMAEQ NKQNQAQQQR  60
RRFEKASAAT SQSFLSESPL DQPWYSQSSS GSQTFMNSAT PSDFSAPAFN YNQAYAQNWQ  120
GLAPVSEASQ TWNLRAEEST GSDWGLSSDS GKSSILSTSF TPRLEESEKP VPAEDSSAAS  180
YTEEAPKRKR YRGVRQRPWG KWAAEIRDPK KAARVWLGTF DTPEEAARAY DRAAINFRGL  240
RAKLNFQDSR DVLAVSGAAT QAEASASRRS PPKSKAAAAI AIAASRAATP ESVLVSRAQT  300
QSIPQQSPPP AHPERLGVEE PAYYPSQISY PAHFRSSTVG QQQQLQLEEQ RKQLEQQRMR  360
KSQELLQGIF SQYMSSASQS MSLLSSGAGP SSHGSSGDHS SALMSSGAHT STIMTTEATR  420
DDRAANPAVW MQQQQYVQEQ QQSSSSANVF QNSQHEWNPV MQQQQQQQQQ QRQVPTMMNQ  480
LVDQQHQQLL FQRDQQPAPQ ELSFEQIFEQ GGPNDWGLID PVDLCELNNS SVKELTGFNV  540
WNMYPQQDRP ASSGS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-20189246159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176W9V10.0A0A176W9V1_MARPO; Uncharacterized protein
TrEMBLA0A2R6W3D80.0A0A2R6W3D8_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-30related to AP2 6l