PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0132s0008.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | HB-other | ||||||||
Protein Properties | Length: 240aa MW: 27509.7 Da PI: 8.8499 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.1 | 4.1e-10 | 107 | 162 | 3 | 55 |
--SS--HHHHHHHHHHHHH...SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek...nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +R +t+e l++L + ek +yps++e e++++++Lt +q++ WF+N R ++ Mapoly0132s0008.1.p 107 SRSVHTPESLQILRTWWEKnelIPYPSQREVYEMSRRTNLTLQQISDWFKNERSRK 162 6999**************833459*****************************984 PP | |||||||
2 | Homeobox | 33.1 | 9.3e-11 | 192 | 227 | 21 | 56 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++ps+e+re+LAk+ g+t qV++WF N R + k Mapoly0132s0008.1.p 192 SHPNPSREQREDLAKESGVTYVQVSNWFMNFRKRSK 227 689*****************************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.9E-16 | 87 | 164 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 12.617 | 102 | 165 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.7E-10 | 104 | 169 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 5.85E-14 | 106 | 164 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 2.39E-11 | 108 | 164 | No hit | No description |
Pfam | PF05920 | 5.3E-9 | 122 | 161 | IPR008422 | Homeobox KN domain |
PROSITE profile | PS50071 | 11.969 | 166 | 229 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 7.7E-14 | 168 | 233 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 2.7E-4 | 170 | 233 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 2.3E-19 | 173 | 230 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 4.8E-11 | 186 | 225 | IPR008422 | Homeobox KN domain |
CDD | cd00086 | 1.83E-7 | 193 | 227 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 204 | 227 | IPR017970 | Homeobox, conserved site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MDMDSSSDQL AWAPVPSPDD EIVTEMRACE PCNRGEEFAS APISQGSMRE VLESNHPTCS 60 QQLEFTPRPA PVDDHVKATN SILDTNDDSS TGSLTSSRRK ELEGTGSRSV HTPESLQILR 120 TWWEKNELIP YPSQREVYEM SRRTNLTLQQ ISDWFKNERS RKWRDDPRKK KANRLPPRAT 180 RLLSTWASEH LSHPNPSREQ REDLAKESGV TYVQVSNWFM NFRKRSKARI RKAKASNIP* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6W7U6 | 1e-176 | A0A2R6W7U6_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP167 | 17 | 148 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 2e-09 | BEL1-like homeodomain 1 |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0132s0008.1.p |