PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0093s0028.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family HB-other
Protein Properties Length: 943aa    MW: 103818 Da    PI: 5.8212
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0093s0028.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox20.21e-068588961854
                          HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          lF++  n++p++e++  +A+  ++te+qV++ F N Ra+
  Mapoly0093s0028.1.p 858 LFQNfqNPNPTRETKLMIATMFNITEKQVTNHFVNLRAR 896
                          577555********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003890.0034839904IPR001356Homeobox domain
SuperFamilySSF466893.68E-11843908IPR009057Homeodomain-like
CDDcd000864.99E-5843896No hitNo description
Gene3DG3DSA:1.10.10.602.4E-16843902IPR009057Homeodomain-like
PfamPF059204.3E-8857896IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 943 aa     Download sequence    Send to blast
MVYVANPLET DKSIEHSQKQ EDQPAAPGID SMSRASKEVP RSTVKESESS DLQTQRSAGP  60
VQAVPELHRI LDSTNELWRL RGGAVNNHPT EVICVPDGER TAVPQISPSD YLNGTAKENV  120
NYINWYQHGL TNSMPTGRIV TCYAGNNPSD SSTRGETGRN VDISVLTSFH KVSSEEKWDA  180
QALYGDVYSD DPLFHIVPSA CPGTASGAVA CSEIEPKKFG IGFSTEENVC DLKGQRTIAT  240
LEGLKHDEPF AFDDYRADHF FLADPSGNQT LDNCVPELRS AFRVTNSSVA ETVSQHLIHH  300
GETSQSAVHP QEKVLPAPTS PIFQLEQYDD IMIFNHHAQQ WQDELMNLNY HEANAEGNVG  360
LTSGYKGSAT MPVLPEQPQF EAINPFPTRH AVSAPDVATD CFSFWPGEHS STYHSLEDQS  420
TPYVWPGSPT SEQALTPSYP TEAGTSSYTW KTTDSSLVTA AVDDAKPEKT ARKHGVPAEP  480
CASSGDWLES RGSPTCSMSP CAKGKQIAVS TTSQIDKISI CQRVSAEQGR TEMLEMLQTV  540
FPDSLDLSQE DNKHVRDARL AWLQEHAKED ILQNSKRDRT NSTEMLSRPT SSLRKKKQKD  600
QEIPEGRLRG TSICTDPDLS YGLAAVQNVL EDFHKSAGLI LKAKKLQNQR PSVTDLLNAE  660
LEALCIGDAL GPEVKGFIMT VIKIGHGKQP AATNPDMVEQ ILQLKWRLAS LMEESRNHER  720
STLAQLRDTF TRYSFLFPSS ASDSFDKRAI PSKYYQDLEN VVCQYFRGCS LFFKRSASSA  780
SSSSGQQGHE NSSNTGGAPD VHAKVRGPLP VEVLGEANAG TSPVVETSDR SRMASRKELS  840
GARGNLPKVA ADYMRQWLFQ NFQNPNPTRE TKLMIATMFN ITEKQVTNHF VNLRARKFRP  900
LLRSLQEDPR SDAGHDMQNP DAENKAGPEG PTSAKCAEKI RT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WGG60.0A0A2R6WGG6_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-09BEL1-like homeodomain 11