PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0061s0030.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 497aa    MW: 53878.1 Da    PI: 5.6779
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0061s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.25.2e-21244304259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          dDgy WrKYG K++k + + r+Y++C +    +C+++k v+++++dp+v+++tY+++H+++
  Mapoly0061s0030.1.p 244 DDGYLWRKYGNKPIKTASYKRGYFKCRHFkemKCNATKIVQQTNSDPSVFHVTYKDTHTCK 304
                          8*************************9977889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.993238301IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.4E-23239305IPR003657WRKY domain
SuperFamilySSF1182909.29E-21241305IPR003657WRKY domain
SMARTSM007741.3E-27243305IPR003657WRKY domain
PfamPF031061.5E-20244304IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    Send to blast
METTNESPTI TVLRRDVEDI KDCLVQLSAK QESICSSDIL QACSRVDGEA KCCNSEAKRV  60
LTEKQDQMSF LLKFVLNKLE HILPTAASTG QVESSSGLKR SRPLTPLRVC RPSGAGFLAD  120
SGPGGNGVSG VTGAEDTPPT SPGPNKFYKV GTDSKAPGHR LYMPTAIIGK LSVETAASAS  180
IAVGSNSFGN GVSSKPVVNA LGIKSPKKRP TRSRRDRNRQ RNKQSEAPVA IQRLKPGEQG  240
KIPDDGYLWR KYGNKPIKTA SYKRGYFKCR HFKEMKCNAT KIVQQTNSDP SVFHVTYKDT  300
HTCKQAPQHG GAAGGVNHSA DGENGSLADQ ISRVGDMPCE TLDYEPAGLD WPASPDNSSA  360
SEDLFPQSEE EGVESSRLGD QHSLLDFADD LGPELSQDLA DANLLQQVQD SSLGSLDVSQ  420
VQNWQQVTTS PEKLKLHPGK MHPGLDQLEM DQLDVVNMEE IVLNASQGCN WNFEFSDIAF  480
WQPELVDVQS CFQPGD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176W3570.0A0A176W357_MARPO; Uncharacterized protein
TrEMBLA0A2R6WSD90.0A0A2R6WSD9_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66560.15e-18WRKY DNA-binding protein 64