PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0060s0052.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 472aa    MW: 51155.1 Da    PI: 8.4294
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0060s0052.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-19175224255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           y+GVr+++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++l+g
  Mapoly0060s0052.1.p 175 IYRGVRRRS-WGKWVSEIREPRK---KSRIWLGSFATPEMAARAYDVAALSLRG 224
                          69****887.**********843...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.3E-13174224IPR001471AP2/ERF domain
CDDcd000186.26E-33174234No hitNo description
SuperFamilySSF541716.41E-22175234IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-31175234IPR001471AP2/ERF domain
PROSITE profilePS5103224.065175232IPR001471AP2/ERF domain
SMARTSM003803.5E-39175238IPR001471AP2/ERF domain
PRINTSPR003676.6E-13176187IPR001471AP2/ERF domain
PRINTSPR003676.6E-13214234IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MVEKAASSLA VRRSAALLFL LSARNSSATA AASSSSTGSC KASTLNHQSP NGAHAPLSPL  60
SPLSPCSRPC LPLSFSASPS PSPPARHSRS FSCLTSESDQ ASPLSDGASG FPNATFEWSP  120
RILKDDGDSQ QTNSGSDHDA ELQKIVSHVE DAPPPTAESR KRARRKPQED TRHPIYRGVR  180
RRSWGKWVSE IREPRKKSRI WLGSFATPEM AARAYDVAAL SLRGSAALLN FPESVPSLPR  240
PTVMSPKAIQ AAAAAAAFSL PVPMAEPSPD SSKCSTSCCR SGPCTPKLSS MSRPTAPPSP  300
ISPISRMRSF TQSQNSSTKP RPTVSSISSN GGQQQQHHHQ QLQQQQQQQK QHHQPQEQHH  360
QPQPIRSQPT SFNRCSTTES SFMDSRRMAA AAPTPVSYHC SQAAMINEPD DSYLDEDLLF  420
DMPSVLSSMA QAMLLPSPVM EEQQQTLTPT MMTYFDDQDG NLVWESDLWS L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-191732321272Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WSY70.0A0A2R6WSY7_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-31ERF family protein