PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0051s0057.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 591aa    MW: 63244.1 Da    PI: 5.7405
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0051s0057.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30330388259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +D ++WrKYGqK++kgs+fpr+YYrC+s+ gC+++k+vers+++p++++itY+ eHnh+
  Mapoly0051s0057.1.p 330 SDLWAWRKYGQKPIKGSPFPRGYYRCSSSkGCSARKQVERSRTEPSMLIITYTAEHNHP 388
                          699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.856324390IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.3E-30325390IPR003657WRKY domain
SuperFamilySSF1182901.7E-25327390IPR003657WRKY domain
SMARTSM007741.2E-36329389IPR003657WRKY domain
PfamPF031061.7E-25331388IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    Send to blast
MEHSDGDLGA VVRAGTCSSL SSVTGSGSGG GGGGGGGAQS QLLNMVEMES HRQNMNKRKA  60
VDSGFPSGSS SPSSVLQCNS PLLLSDLSKS LTGVSTTATT TGADVEGSLH EVCQLGYNFN  120
GSAASSYYSS LESANTAIDS PRNPFYAQND RISEALSRNL QQRDQQQQQQ QQQQQQHQQC  180
LKKTNMISEL LSSSSMNMNL NRSRLRPGPV SQSLDSGRLS QDMIKEDFFQ GGSSSSFNHR  240
SSQCAADSSS EQLSSSHHSS PAREDHMATL GPVKKIEAAC NTKLEDSLDY GSPGSLASSK  300
GPKRRKNQQK RIVCVPVAAS GRPTSEGLPS DLWAWRKYGQ KPIKGSPFPR GYYRCSSSKG  360
CSARKQVERS RTEPSMLIIT YTAEHNHPWP SHRNALAGSS RMSSLDKGTL AQETANLKAE  420
AGDAGEAGVS VAESPVNSMD HDTDTGVMDE PEPELELPEA HQAPGSPSTT TLELDGGEAQ  480
GADSSEPFTS MLSSHQHQHQ HQRGDFEVAH HHQGNLHLTG RSGMSMQDDD FFSELGELPE  540
SLLMFGGRTG VMEDRSDDEC GNLGMDNVDP YNLFCWSSGS HLESSSNVVM *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-22306391280Disease resistance protein RRS1
5w3x_D5e-22306391280Disease resistance protein RRS1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1299305KGPKRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WX730.0A0A2R6WX73_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-50WRKY DNA-binding protein 35