PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0046s0038.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 586aa    MW: 63083.2 Da    PI: 6.3729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0046s0038.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.11.4e-1590139255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +grWvAeIr+p+    r +r++lg+f ta +Aa a++ a+ +l+g
  Mapoly0046s0038.1.p  90 QYRGVRQRS-WGRWVAEIREPR----RrARIWLGTFATAVDAAHAYDCAAWRLYG 139
                          59****999.**********83....35*******************99988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.6E-2890147IPR001471AP2/ERF domain
CDDcd000189.62E-2890148No hitNo description
SMARTSM003807.1E-3290153IPR001471AP2/ERF domain
PROSITE profilePS5103221.86590147IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-1990147IPR016177DNA-binding domain
PfamPF008473.4E-1091139IPR001471AP2/ERF domain
PRINTSPR003677.4E-991102IPR001471AP2/ERF domain
PRINTSPR003677.4E-9113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MQLNDTREEL SSDRVDDPQC EDAHGEGSGG DKARAGATTA TASQQQQQQQ QLQLVAAAAS  60
GGGGGGAAAA AGARRGRGKG KGGPQNGLFQ YRGVRQRSWG RWVAEIREPR RRARIWLGTF  120
ATAVDAAHAY DCAAWRLYGP RARLNLAYPI SSQPSDSPPL ESCIQTSQAS TSNSSSCSLK  180
PLLPAIAPRP NLAHVQSQCQ PPPAAAPMPH HLLDFRHVEA LVPAAIPMPA ASLRDAAGWH  240
LYSRSSEKSL IGENFADDKS KVRLLLGAPA PLNSKGRTQF QSPNLYDCCR GVPDCCSSIA  300
RDENFRIHGR ESEIDVPGLS ESTAVVGLAA QLMTANSTHG LSDACSLIER VEAAMQIQDL  360
HHEALRSQKL HLDAVQSRER ELQRNSSAPG SLEFRPIKAE PQERAATDYS HLQQAPLDAV  420
VPPLVCSSDQ FRWPDTVQPT AASREADASI AACKEWWHPI ARQILNSCSP EFESADEYTV  480
PSTATAVQAQ QHPSLLWNSP EHSLSSSPSV TSPMPPTMIW NSSEQSLTSP PSVTSSSHPI  540
LADGQWEYLP ASGSMSNNTL NCCHSDACNC SCSFMDYDSF MHIMQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-1690152568ATERF1
3gcc_A5e-1690152568ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WZF20.0A0A2R6WZF2_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.17e-10ERF family protein