PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0040s0116.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 421aa    MW: 46948.4 Da    PI: 6.5094
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0040s0116.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.49.1e-21192256259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.......T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.......gCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dg+ WrKYG K++k + f +sYYrC ++       +C++kk v+++++dp+++++ Yeg+H ++
  Mapoly0040s0116.1.p 192 EDGFLWRKYGSKNIKMAAFKKSYYRCNHPcshstakKCTAKKTVQQKDDDPHLLQVAYEGSHSCK 256
                          7************************977666667779*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-22181256IPR003657WRKY domain
PROSITE profilePS5081118.349186258IPR003657WRKY domain
SuperFamilySSF1182903.92E-19189256IPR003657WRKY domain
SMARTSM007741.0E-24191257IPR003657WRKY domain
PfamPF031062.2E-19192256IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MEPPKRTRLS DGINFDYSQV DALPENIEMK KILSCLSELS SANENSMRTT ELLQVYRSSN  60
LDGDSKCFSP EAIHAMAEHQ EKLRGLLGLV SSKLKLILPF QNQILSHTGG MGNSTQHMNT  120
FFMSPSSLVE PAHTWNTSAE ALDAISPAVN ITPTLKTVKT TKKKNRQRER KNKKPQTPLH  180
VVNAENDGKV PEDGFLWRKY GSKNIKMAAF KKSYYRCNHP CSHSTAKKCT AKKTVQQKDD  240
DPHLLQVAYE GSHSCKAALE FQRGSSTEDP DKAESLNLDD QMSSRANARH NPDPASEWSH  300
IVNPVRTSSG SFSAVSEDGN DQSEEGDGNN SSVSRKDGLG NVHALPEFDI ELDIDPIQDW  360
PDCPDFKMFQ GTRSYVDQTD IIEDHAKVLL ENIMRPCSPG FQFGAIETLN DIQNWHGHYR  420
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176W7X30.0A0A176W7X3_MARPO; Uncharacterized protein
TrEMBLA0A2R6X2W00.0A0A2R6X2W0_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.26e-16WRKY DNA-binding protein 57