PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0039s0030.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 596aa    MW: 63733.9 Da    PI: 7.9585
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0039s0030.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.1e-30322381159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+H h+
  Mapoly0039s0030.2.p 322 MNDGCQWRKYGQKLAKGNPCPRAYYRCTVApGCPVRKQVQRCAEDRSILTTTYEGTHSHP 381
                          58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-32307383IPR003657WRKY domain
SuperFamilySSF1182901.83E-27314383IPR003657WRKY domain
PROSITE profilePS5081128.036317383IPR003657WRKY domain
SMARTSM007741.1E-35322382IPR003657WRKY domain
PfamPF031069.1E-27323381IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    Send to blast
MGLNNDESRS TEAISSQRLR SQRIELSVAL PFEISSEMAL TVDSGSPPQS HASNTATVAS  60
HFVSLSTNTR ETDVPRTTQQ FLENELKRTR TEMEHMIDEN QQMRKVLSLM TAEYNALYQQ  120
LVTTVALQQQ QGKTEKFSQL SQVPLATALN VEVVQGNGQR ASPQRSFTEH SSHSAGSERS  180
RSATPTGSAQ VSSRSPGRSK HGDKQTSPLR VKLEDDTNQK IIVQALPTVM PMDTDKAAVN  240
MFRAYKEESS SQAIDASNPS ESPELGFASE ARESASQDEP SVAEQLEQNG WPPNKRMKSV  300
LQDTSVRNAR VSVRTRTDAP TMNDGCQWRK YGQKLAKGNP CPRAYYRCTV APGCPVRKQV  360
QRCAEDRSIL TTTYEGTHSH PLPAAAVAMA STTSAAAGML LLGSTSSSDR AEGLGSDNSF  420
NLGTHSMPII SASAPFPTIT LDLTNNPAAN QMHLDAANGN RQPYTFSMAQ NGIQMHAPSM  480
MAPVQSSYYG AAKPPSGTFQ MYSGNPLMVQ FQGGNTARGP QLLADSVTAA TAAITSDPNF  540
TAALAAAITS ILSSQPNNQL AATNSSSLGE ALRGALSSHG LPITAAKKDT ASRST*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22309383174WRKY transcription factor 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X3340.0A0A2R6X334_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-51WRKY family protein