PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0039s0030.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 635aa    MW: 68039.5 Da    PI: 7.977
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0039s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.38.8e-30361420159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+H h+
  Mapoly0039s0030.1.p 361 MNDGCQWRKYGQKLAKGNPCPRAYYRCTVApGCPVRKQVQRCAEDRSILTTTYEGTHSHP 420
                          58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-32346422IPR003657WRKY domain
SuperFamilySSF1182902.09E-27353422IPR003657WRKY domain
PROSITE profilePS5081128.036356422IPR003657WRKY domain
SMARTSM007741.1E-35361421IPR003657WRKY domain
PfamPF031069.9E-27362420IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 635 aa     Download sequence    Send to blast
MGLNNDESRS TEAISSQRLR SQRIELSVAL PFEISSEMAL TVDSGSPPQS HASNTATVAS  60
HFVSLSTNTR ETDVPRTTQQ FLENESRHPM NLRNGSNDRP TVEDGSPPLS PQRPSQSNSD  120
LHNQLKRTRT EMEHMIDENQ QMRKVLSLMT AEYNALYQQL VTTVALQQQQ GKTEKFSQLS  180
QVPLATALNV EVVQGNGQRA SPQRSFTEHS SHSAGSERSR SATPTGSAQV SSRSPGRSKH  240
GDKQTSPLRV KLEDDTNQKI IVQALPTVMP MDTDKAAVNM FRAYKEESSS QAIDASNPSE  300
SPELGFASEA RESASQDEPS VAEQLEQNGW PPNKRMKSVL QDTSVRNARV SVRTRTDAPT  360
MNDGCQWRKY GQKLAKGNPC PRAYYRCTVA PGCPVRKQVQ RCAEDRSILT TTYEGTHSHP  420
LPAAAVAMAS TTSAAAGMLL LGSTSSSDRA EGLGSDNSFN LGTHSMPIIS ASAPFPTITL  480
DLTNNPAANQ MHLDAANGNR QPYTFSMAQN GIQMHAPSMM APVQSSYYGA AKPPSGTFQM  540
YSGNPLMVQF QGGNTARGPQ LLADSVTAAT AAITSDPNFT AALAAAITSI LSSQPNNQLA  600
ATNSSSLGEA LRGALSSHGL PITAAKKDTA SRST*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-22348422174WRKY transcription factor 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176VPX90.0A0A176VPX9_MARPO; Uncharacterized protein
TrEMBLA0A2R6X3380.0A0A2R6X338_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-51WRKY family protein