PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0039s0030.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | WRKY | ||||||||
Protein Properties | Length: 635aa MW: 68039.5 Da PI: 7.977 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.3 | 8.8e-30 | 361 | 420 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+H h+ Mapoly0039s0030.1.p 361 MNDGCQWRKYGQKLAKGNPCPRAYYRCTVApGCPVRKQVQRCAEDRSILTTTYEGTHSHP 420 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.5E-32 | 346 | 422 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-27 | 353 | 422 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.036 | 356 | 422 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.1E-35 | 361 | 421 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.9E-27 | 362 | 420 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 635 aa Download sequence Send to blast |
MGLNNDESRS TEAISSQRLR SQRIELSVAL PFEISSEMAL TVDSGSPPQS HASNTATVAS 60 HFVSLSTNTR ETDVPRTTQQ FLENESRHPM NLRNGSNDRP TVEDGSPPLS PQRPSQSNSD 120 LHNQLKRTRT EMEHMIDENQ QMRKVLSLMT AEYNALYQQL VTTVALQQQQ GKTEKFSQLS 180 QVPLATALNV EVVQGNGQRA SPQRSFTEHS SHSAGSERSR SATPTGSAQV SSRSPGRSKH 240 GDKQTSPLRV KLEDDTNQKI IVQALPTVMP MDTDKAAVNM FRAYKEESSS QAIDASNPSE 300 SPELGFASEA RESASQDEPS VAEQLEQNGW PPNKRMKSVL QDTSVRNARV SVRTRTDAPT 360 MNDGCQWRKY GQKLAKGNPC PRAYYRCTVA PGCPVRKQVQ RCAEDRSILT TTYEGTHSHP 420 LPAAAVAMAS TTSAAAGMLL LGSTSSSDRA EGLGSDNSFN LGTHSMPIIS ASAPFPTITL 480 DLTNNPAANQ MHLDAANGNR QPYTFSMAQN GIQMHAPSMM APVQSSYYGA AKPPSGTFQM 540 YSGNPLMVQF QGGNTARGPQ LLADSVTAAT AAITSDPNFT AALAAAITSI LSSQPNNQLA 600 ATNSSSLGEA LRGALSSHGL PITAAKKDTA SRST* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 4e-22 | 348 | 422 | 1 | 74 | WRKY transcription factor 1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A176VPX9 | 0.0 | A0A176VPX9_MARPO; Uncharacterized protein | ||||
TrEMBL | A0A2R6X338 | 0.0 | A0A2R6X338_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04450.1 | 1e-51 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0039s0030.1.p |