PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0038s0075.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 590aa    MW: 60575.8 Da    PI: 4.6738
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0038s0075.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.3e-1795143254
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                          ++ GVr+++ +grWvAeI+d +   ++ r +lg+f+tae+Aa+a+++a+  l+
  Mapoly0038s0075.1.p  95 RFVGVRQRP-SGRWVAEIKDTT---QKIRLWLGTFDTAEDAARAYDEAAWLLR 143
                          789******.7*********32...35*********************96665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.65E-3094151No hitNo description
SuperFamilySSF541716.41E-1995152IPR016177DNA-binding domain
PROSITE profilePS5103219.88895152IPR001471AP2/ERF domain
SMARTSM003807.4E-3495158IPR001471AP2/ERF domain
PfamPF008471.8E-1195139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-2795152IPR001471AP2/ERF domain
PRINTSPR003673.8E-796107IPR001471AP2/ERF domain
PRINTSPR003673.8E-7118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    Send to blast
MAANSNVGST NSGSSRRTSS SGGRAGSVAS SLSKTLSAGS NAEVNSSETS SGSFSCMTTT  60
TSSGSEGAVA ASIEMVGGGG GLRRAVSAGG KTKKRFVGVR QRPSGRWVAE IKDTTQKIRL  120
WLGTFDTAED AARAYDEAAW LLRGANTRTN FVPSTSTDAS VLPSKAARLL QLRKNAAAAT  180
ASSQETNNIS NGATPPAAAA AAASAHVNSK PPQAQSGTSA GNKLEGNDNA NSIYSAPPKS  240
PPIPPAVVLP CSGSNNSNQA PPPPPPPLTV VTSASAASTS PYCSSNIGHV SNFSGEVSKS  300
ESSNYESSVE EMCEMDEAPG LNNAPGLFNP DLDESQRRNG HPTLVNVKQE LVSNTYQPRV  360
ELSPIRENRK EKDYCSEAPP QDSFVDDTDM SSGLSGLDDV GLSGVDSCYT SDFDFPADMG  420
PDLDLGSLIP SPLSADLSNG DEEDSLSEHV RRMSYERQIS AGLYAINGVQ ECLSLSSHSW  480
GPSSWNGGLS SPSLTLTAGF RRSSTSAPFL TASPVAGWKS VGSSGGSGSS SWVSSSQQQQ  540
QQQQANSSGG STGSGSNGSN NSAVAESAEC PSQDALWQSW DLPPLCVVA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1390151971Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X3R50.0A0A2R6X3R5_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-22related to AP2 11