PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0036s0109.3.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family NF-X1
Protein Properties Length: 1011aa    MW: 108973 Da    PI: 8.1528
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0036s0109.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X117.31e-05163181119
             zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                          CG+H+C+++CHeG C  C+
  Mapoly0036s0109.3.p 163 CGRHSCSRICHEGSCELCK 181
                          ***************9886 PP
2zf-NF-X117.68.6e-06227244118
             zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                          CG+H Cq++CH+GpC++C
  Mapoly0036s0109.3.p 227 CGNHECQEKCHPGPCGEC 244
                          ****************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd060083.43E-792146No hitNo description
SMARTSM004380.093108126IPR000967Zinc finger, NF-X1-type
PfamPF014220.049109125IPR000967Zinc finger, NF-X1-type
CDDcd060081.92E-11153201No hitNo description
SMARTSM004380.0015163182IPR000967Zinc finger, NF-X1-type
PfamPF014221.2E-4163181IPR000967Zinc finger, NF-X1-type
CDDcd060083.13E-9217260No hitNo description
SMARTSM004382.7E-4227246IPR000967Zinc finger, NF-X1-type
PfamPF014222.6E-4227244IPR000967Zinc finger, NF-X1-type
CDDcd060082.13E-12281328No hitNo description
SMARTSM004389.0E-4291310IPR000967Zinc finger, NF-X1-type
PfamPF014220.05293309IPR000967Zinc finger, NF-X1-type
SMARTSM00438220356387IPR000967Zinc finger, NF-X1-type
PfamPF0142222356367IPR000967Zinc finger, NF-X1-type
CDDcd060083.85E-8385437No hitNo description
PfamPF014220.029389412IPR000967Zinc finger, NF-X1-type
SMARTSM004380.0043395414IPR000967Zinc finger, NF-X1-type
SMARTSM004380.0069452470IPR000967Zinc finger, NF-X1-type
PfamPF014229.3452469IPR000967Zinc finger, NF-X1-type
SMARTSM004386.6505539IPR000967Zinc finger, NF-X1-type
PfamPF014220.076505520IPR000967Zinc finger, NF-X1-type
PfamPF0142294542568IPR000967Zinc finger, NF-X1-type
SMARTSM004380.018548569IPR000967Zinc finger, NF-X1-type
SuperFamilySSF827085.69E-7657754IPR001374R3H domain
PROSITE profilePS5106110.734676742IPR001374R3H domain
PfamPF014241.3E-5677738IPR001374R3H domain
Gene3DG3DSA:3.30.1370.504.8E-5701748IPR001374R3H domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0000166Molecular Functionnucleotide binding
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1011 aa     Download sequence    Send to blast
MICYDMVGRS SPMWSCGSCY AIFHLNCIKR WARAPTSTDL SVSSANHSLE GNWRCPGCQA  60
VELITARDLR YNCFCGQVDN PPVDHYLTPH SCGGPCKKPL DRSKTKRCNH YCTMQCHPGP  120
CPPCSAVAPS EFCPCGKKTF TRRCGEQKAI SSCGDVCGRK LSCGRHSCSR ICHEGSCELC  180
KVDVNTQCFC GKKHETMSCG AVEIQGNVDF EKGILSCGSR CLKTLSCGNH ECQEKCHPGP  240
CGECEVSPAM LQTCPCGKKK LLELVGSGRP RINCTDPVPT CGQGCSKVLP CKVHVCRDLC  300
HSGPCPPCRV PVEQKCRCGS SSRSVACHVS QGNPFVGEET EGLFLCERKC GQKKSCGRHR  360
CNNRCCPTTN GSSLQDTSDR DPHDCILACG KKLRCRQHNC QERCHSGHCP PCLESIFTEL  420
SCACGKTSIP PPVPCGTPLP SCQEPCSFHQ PCGHPATHLC HFGDCPPCTV AVTKECVGNH  480
VLLRGVPCGS RDIKCNKLCG KTRQCGLHAC ARACHVPPCD NVEDASARGV KTVKNSCGQP  540
CGAPRRDCSH TCILTCHPSA PCPDNRCKVV VTITCGCGRI SGDVPCDAGG SSTSRASAET  600
EMILSRLPAP LQPIAQSSER TPLGQRKLSC DDECGKLEKK RLLADAFGVE LSGDFTSGDT  660
GALGSEMLSE MLRRDPQWVL AVEERFKFLL LGPKVSTLKV HVFCPMAKEK REVIYQLAER  720
WSLSVSSAGR EPRRFPIVHV TNKSKVPYTR MLSKSQLPPA GQQTPPAFNA AVDMEPGLVV  780
AFFDVPREVD MSGLVLRFAG ECELVWLNDK NALAIFGDVA RAATALRRVD HTTAYKGAIS  840
VPGSAVYTSS KGAWGQAAGS SFATKPSAKK KAVQESSWVE DAWGDDNRKS SKEQLTGAWQ  900
RKEPSIITKN PWGALEQTRA RVSDARLKGC YVSSQPSGTS QASTKEGESS AQGERTKPVK  960
STTKERGDQA GPSGASKEVS NCATVITKSP ADDSLVPQNG EKDDWERLLD *
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024365063.10.0NF-X1-type zinc finger protein NFXL1-like
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A2R6X4X40.0A0A2R6X4X4_MARPO; Uncharacterized protein
STRINGPP1S215_60V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1