PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0035s0081.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | NF-YB | ||||||||
Protein Properties | Length: 223aa MW: 25444.5 Da PI: 4.3591 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 30.4 | 9.5e-10 | 109 | 156 | 49 | 96 |
NF-YB 49 easdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 a d c +e+rk ++ +d++ a lGfe+++eplk+y++++ ++++e Mapoly0035s0081.1.p 109 RAIDTCYQEQRKIMDFEDVMQAARCLGFEKFLEPLKKYMQEHAHFKTE 156 5889************************************99988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.20.10 | 1.1E-9 | 109 | 160 | IPR009072 | Histone-fold |
SuperFamily | SSF47113 | 7.67E-7 | 109 | 161 | IPR009072 | Histone-fold |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MEERVSPLNS GGKMEISSSE ESVMAPQVDR RDLIDFLCGE ELTDADSQDR ESTSNSESCC 60 KNKEDFFKQQ RELGLAVMIK SRNESFEVTP GTELENIIAD IILPRSVARA IDTCYQEQRK 120 IMDFEDVMQA ARCLGFEKFL EPLKKYMQEH AHFKTEESVS SGNGAAYDEF FNLKAEEDDA 180 CTDVPGYDDW YKNVQDLMAM VHNNCCRSCP CRIVKFTREN YK* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6X5F2 | 1e-165 | A0A2R6X5F2_MARPO; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38880.7 | 5e-10 | nuclear factor Y, subunit B1 |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0035s0081.1.p |