PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0035s0054.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | NAC | ||||||||
Protein Properties | Length: 608aa MW: 65831.3 Da PI: 8.4641 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160.4 | 6.8e-50 | 25 | 151 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 pGfrFhPt+eelv +yL++ v+g+++++ e i+++d+y+++Pw+Lp+ + +ekew+fF++rdkky++g r+nr+t+sgyWkatg+d++ Mapoly0035s0054.1.p 25 LPGFRFHPTEEELVGYYLRRMVQGRRNSV-ELIASLDLYQYDPWELPALAFMGEKEWFFFCPRDKKYPNGARPNRVTASGYWKATGTDRP 113 59************************999.89***************7666789************************************ PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 v ++ +++ +glkktLvfy+grap+g+kt+W+m+eyr+ Mapoly0035s0054.1.p 114 VRCSgDSRCIGLKKTLVFYTGRAPRGNKTEWIMNEYRM 151 **9867778***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.1E-56 | 24 | 193 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.903 | 24 | 193 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.6E-26 | 26 | 151 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 608 aa Download sequence Send to blast |
MESIGSKEEG QEEPTAVPEW SEMALPGFRF HPTEEELVGY YLRRMVQGRR NSVELIASLD 60 LYQYDPWELP ALAFMGEKEW FFFCPRDKKY PNGARPNRVT ASGYWKATGT DRPVRCSGDS 120 RCIGLKKTLV FYTGRAPRGN KTEWIMNEYR MPKPAERSIS VMTSGVNSIS YSFSTYDNFV 180 IKNDVALCRI YRKSSSALNS ANFISAIGAR DLEERTNRMM SRFESNPAAG THQQQNHIQR 240 LQGPDVPNVN VRVSSDMPMA PLSAAAPSSD NDCAQQLSTS KTTTVVSHGQ AVEAAKTQRQ 300 QQLIDGPAQG GFDGVSPMID CTGTTTSEEA SRQLQIALRT AMAKLDGAGS SSNVNFNDGD 360 SLNSNGSGIF GRFRNRLVQD AAAAAACPST SVHVMRSPSP EAAAAATATF NNSHTSRVPP 420 TKAPDHLNQP MNSPRDIPTV ARSNRSSSAE TVAAFAPAKS HPTCRTPRVS IPPSFNHHVN 480 SCPSTKSTTT TSHSLEEGSN ADANTVVSGP TAINNRSNIS ASSISQLEDQ VQSLVNACSI 540 PPLSNTYSLK RSRFTKVQHA DGESCPMAKM PSAAQYWRQS SYAPSQTATA AAQLSTFDAL 600 SGLTFQY* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-56 | 26 | 197 | 19 | 169 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-56 | 26 | 197 | 19 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-56 | 26 | 197 | 19 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-56 | 26 | 197 | 19 | 169 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
3swm_B | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
3swm_C | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
3swm_D | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
3swp_A | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
3swp_B | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
3swp_C | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
3swp_D | 5e-56 | 26 | 197 | 22 | 172 | NAC domain-containing protein 19 |
4dul_A | 5e-56 | 26 | 197 | 19 | 169 | NAC domain-containing protein 19 |
4dul_B | 5e-56 | 26 | 197 | 19 | 169 | NAC domain-containing protein 19 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00257 | DAP | Transfer from AT2G02450 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6X584 | 0.0 | A0A2R6X584_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP17 | 15 | 800 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.2 | 1e-65 | NAC domain containing protein 35 |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0035s0054.1.p |