PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0035s0049.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | NAC | ||||||||
Protein Properties | Length: 499aa MW: 54917.4 Da PI: 7.335 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.8 | 3.2e-51 | 14 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtdeelv +yL +k+e+ ++l vi++vd+yk++PwdLp k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk Mapoly0035s0049.1.p 14 LPPGFRFHPTDEELVLHYLGPKAEAYVFNL-PVIADVDLYKHDPWDLPDKAIFGEREWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDK 102 79*************************999.89***************7767799*********************************** PP NAM 91 evlskkgel....vglkktLvfykgrapkgektdWvmheyrl 128 +++++k+ + +g+kk Lvfykgrapkg+kt+W+mheyrl Mapoly0035s0049.1.p 103 PIYRTKDVKtpikIGVKKALVFYKGRAPKGVKTNWIMHEYRL 144 ****844445666***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.84E-62 | 10 | 174 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.693 | 14 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.1E-27 | 15 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence Send to blast |
MVMAAKGPAS SLILPPGFRF HPTDEELVLH YLGPKAEAYV FNLPVIADVD LYKHDPWDLP 60 DKAIFGEREW YFFSPRDRKY PNGARPNRAA GSGYWKATGT DKPIYRTKDV KTPIKIGVKK 120 ALVFYKGRAP KGVKTNWIMH EYRLAENGIS PTHHVHRKGS LRLDDWVLCR IYKKSTNAQR 180 TGKERESSSC VEEVLASLPE IDNPRIMLPR LEQTFSGLMD QDLQTIQNMG SPLMDSFLTG 240 DGSEIGSPNP PEQVESPPDA RSSALQQQQQ QQGGHGTSLQ PKIEPMTHDR VNLNAEQHPL 300 NHSAMVGELG PNNSGAHNAW RPSKDFMQMM SSELFLESHL RQSPPELLDM EDEAQSSYRA 360 SLASTLNYAS GGALNRLHHH SSASSTNNNA GNISSFATAP YLDLQHRSHH DDGTLGSIHA 420 HFTSAGPGNL LSMSMGANAG AMGTSSGTST AYVPSLNHFQ NQQQHNMNLA RQSTAAPVYF 480 DLAHSSNLNH ELTAGRGR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-77 | 1 | 180 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-77 | 1 | 180 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-77 | 1 | 180 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-77 | 1 | 180 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 5e-77 | 1 | 180 | 7 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-77 | 1 | 180 | 4 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-77 | 1 | 180 | 4 | 171 | NAC domain-containing protein 19 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024369623.1 | 1e-121 | NAC domain-containing protein 2-like | ||||
TrEMBL | A0A2R6X576 | 0.0 | A0A2R6X576_MARPO; Uncharacterized protein | ||||
STRING | PP1S140_93V6.1 | 1e-120 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP17 | 15 | 800 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 7e-84 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0035s0049.1.p |